chr10 : 35,637,465 – 35,637,953
488 bp 71 TFs 4 linked genes
This 488 bp open chromatin element is linked to 4 target genes and is bound by 71 transcription factors.
Linked Genes
4 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000287528 3.1 kb Proximal Proximity
MIR4683 3.3 kb Proximal Proximity
FZD8 4.3 kb Proximal Proximity
ENSG00000288893 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:35,632,465 – 35,642,953
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 383 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 486 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 488 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 257 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 488 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 170 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 336 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 379 bp overlap
BRD4 4 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 231 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 370 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 186 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 211 bp overlap
CHD1 1 dataset
ChIP IMR-90 ENCSR000EFC.CHD1.IMR-90 136 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 488 bp overlap
ChIP H1 ENCFF126NLU 166 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 257 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 348 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 147 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 285 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 195 bp overlap
ELK4 2 datasets
ChIP HEK293 ENCFF309WLN 135 bp overlap
ChIP HEK293 ENCFF309WLN 340 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 277 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 149 bp overlap
ESR1 6 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 229 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 198 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 129 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 146 bp overlap
ChIP T-47D ENCSR000BKN.ESR1.T-47D 118 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 263 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 109 bp overlap
EZH2 6 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 382 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 488 bp overlap
ChIP neural progenitor cell ENCFF018MKA 488 bp overlap
ChIP neural progenitor cell ENCFF472NFV 488 bp overlap
ChIP neural progenitor cell ENCFF472NFV 488 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 457 bp overlap
EZH2_phosphoT487 2 datasets
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 283 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 387 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 221 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 278 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 101 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 218 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 56 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 50 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 78 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 264 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 139 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 140 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 186 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 101 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 327 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 180 bp overlap
MED1 2 datasets
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 344 bp overlap
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 251 bp overlap
MYNN 4 datasets
ChIP HEK293 ENCFF897QZG 231 bp overlap
ChIP HEK293 ENCSR707BNG.MYNN.HEK293 406 bp overlap
ChIP HEK293 GSE76494.MYNN.HEK293 197 bp overlap
ChIP K-562 ENCSR737LTZ.MYNN.K-562 297 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 126 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 488 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 257 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 311 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 418 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 488 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 488 bp overlap
ChIP hESC GSE18292.NANOG.hESC 232 bp overlap
ChIP hESC GSE20650.NANOG.hESC 158 bp overlap
NEUROD1 3 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 77 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 187 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 351 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nr2e3 1 dataset
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 441 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 357 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 488 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF566JSR 402 bp overlap
ChIP SK-N-MC ENCFF088IVG 360 bp overlap
ChIP sigmoid colon ENCFF653CQA 425 bp overlap
POU5F1 7 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 488 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 194 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 255 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 146 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 488 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 162 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 218 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 419 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 185 bp overlap
RAD21 5 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 236 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 373 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 109 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 170 bp overlap
RARA 3 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 488 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 488 bp overlap
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 102 bp overlap
RNF2 2 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 488 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 340 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 468 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 307 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 230 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 153 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 314 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 423 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 216 bp overlap
SMAD2_3 1 dataset
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 268 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 305 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 436 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 391 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 326 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 414 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 355 bp overlap
SMARCC1 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 284 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 288 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 301 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 288 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 250 bp overlap
SOX2 7 datasets
ChIP H9 GSE46837.SOX2.H9 226 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 295 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 256 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 138 bp overlap
ChIP hESC GSE18292.SOX2.hESC 102 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 252 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 300 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 488 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 181 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 218 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 152 bp overlap
SUPT16H 2 datasets
ChIP hiF-T GSE98758.SUPT16H.hiF-T 185 bp overlap
ChIP hiF-T GSE98758.SUPT16H.hiF-T 187 bp overlap
SUZ12 4 datasets
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 297 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 314 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 362 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 282 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 333 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 294 bp overlap
TBP 4 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 173 bp overlap
ChIP hESC GSE122298.TBP.hESC 156 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 307 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 165 bp overlap
TBX5 1 dataset
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 217 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 172 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 344 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 235 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 301 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 334 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 285 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 196 bp overlap
ZNF143 2 datasets
ChIP WA01 ENCSR000EBW.ZNF143.WA01 215 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 285 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 185 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 250 bp overlap
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