chr9 : 137,252,677 – 137,252,835

158 bp 65 TFs 2 linked genes

This 158 bp open chromatin element is linked to STPG3-AS1 and NELFB and is bound by 65 transcription factors.

Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
STPG3-AS1		661 bp	At TSS	Proximity
NELFB		2.5 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

65 transcription factors

AFF4 1 dataset

ChIP MCF-7 GSE144036.AFF4.MCF-7 158 bp overlap

AGO1 3 datasets

ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 158 bp overlap

ChIP Hep-G2 GSE120104.AGO1.Hep-G2 158 bp overlap

ChIP K-562 ENCSR641BSL.AGO1.K-562 125 bp overlap

AR 1 dataset

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 136 bp overlap

BCL6 1 dataset

ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 158 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 158 bp overlap

BRD4 5 datasets

ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 158 bp overlap

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 141 bp overlap

ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 158 bp overlap

ChIP T-47D ERP003925.BRD4.T-47D 158 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 158 bp overlap

E2F6 3 datasets

ChIP H1 ENCFF785DWK 158 bp overlap

ChIP K562 ENCFF136LTS 158 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 91 bp overlap

EGR1 1 dataset

ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 154 bp overlap

ESR1 3 datasets

ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 158 bp overlap

ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 158 bp overlap

ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 158 bp overlap

FIP1L1 1 dataset

ChIP Hep-G2 ENCSR313VZG.FIP1L1.Hep-G2 158 bp overlap

GFI1B 1 dataset

ChIP K-562 ENCSR509GDT.GFI1B.K-562 117 bp overlap

GLIS2 1 dataset

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 158 bp overlap

GRHL2 1 dataset

ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 158 bp overlap

HDAC1 1 dataset

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 158 bp overlap

HEXIM1 1 dataset

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 158 bp overlap

HIVEP1 1 dataset

ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 84 bp overlap

HNRNPK 2 datasets

ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 158 bp overlap

ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 147 bp overlap

HNRNPLL 2 datasets

ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 144 bp overlap

ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 121 bp overlap

HOXA3 1 dataset

ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 149 bp overlap

JUN 1 dataset

ChIP MCF-7_BD610326 GSE128445.JUN.MCF-7_BD610326 128 bp overlap

KDM5B 1 dataset

ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 158 bp overlap

KDM6B 1 dataset

ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 69 bp overlap

KLF3 1 dataset

ChIP keratinocyte GSE140991.KLF3.keratinocyte 158 bp overlap

KLF5 1 dataset

ChIP ESO-26 GSE132680.KLF5.ESO-26 158 bp overlap

KLF9 5 datasets

ChIP GBM1A GSE62211.KLF9.GBM1A 97 bp overlap

ChIP HEK293 ENCFF588INF 158 bp overlap

ChIP HEK293 ENCSR076EZB.KLF9.HEK293 158 bp overlap

ChIP MCF-7 ENCFF618FCM 158 bp overlap

ChIP MCF-7 ENCSR125ZYC.KLF9.MCF-7 158 bp overlap

MAX 6 datasets

ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 121 bp overlap

ChIP Ishikawa ENCFF064TDQ 158 bp overlap

ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 115 bp overlap

ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 117 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 158 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 158 bp overlap

MAZ 1 dataset

ChIP HeLa-S3 ENCSR000ECL.MAZ.HeLa-S3 106 bp overlap

MED1 2 datasets

ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 144 bp overlap

ChIP K-562 GSE97661.MED1.K-562 130 bp overlap

MLLT1 2 datasets

ChIP GM12878 ENCFF995GXC 145 bp overlap

ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 104 bp overlap

MNX1 1 dataset

ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 127 bp overlap

MTA1 1 dataset

ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 158 bp overlap

NELFE 1 dataset

ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 158 bp overlap

NFKB1 1 dataset

ChIP HEK293T GSE129618.NFKB1.HEK293T 158 bp overlap

NOTCH1 1 dataset

ChIP HPBALL GSE39263.NOTCH1.HPBALL 125 bp overlap

OGG1 1 dataset

ChIP HEK293 GSE89017.OGG1.HEK293 88 bp overlap

PATZ1 1 dataset

ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 158 bp overlap

PBX3 2 datasets

ChIP GM12878 ENCFF285BQQ 158 bp overlap

ChIP GM12878 ENCSR000BGR.PBX3.GM12878 130 bp overlap

PCBP1 1 dataset

ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 158 bp overlap

PKNOX1 6 datasets

ChIP GM12878 ENCFF589FCY 158 bp overlap

ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 158 bp overlap

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 158 bp overlap

ChIP K562 ENCFF236IUS 158 bp overlap

ChIP MCF-7 ENCFF116OCS 158 bp overlap

ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 158 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 158 bp overlap

PTBP1 1 dataset

ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 71 bp overlap

RBFOX2 1 dataset

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 96 bp overlap

RELA 1 dataset

ChIP BJAB_1h-activation GSE117250.RELA.BJAB_1h-activation 116 bp overlap

RORC 2 datasets

ChIP HCC70 GSE126380.RORC.HCC70 158 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 158 bp overlap

RYBP 1 dataset

ChIP WA01 GSE104690.RYBP.WA01 151 bp overlap

SMAD1 1 dataset

ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 113 bp overlap

SMARCA4 1 dataset

ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 89 bp overlap

SP5 1 dataset

ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 72 bp overlap

SREBP2 2 datasets

ChIP HCC70 GSE126380.SREBP2.HCC70 158 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 129 bp overlap

SUZ12 1 dataset

ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 158 bp overlap

TAF15 2 datasets

ChIP Hep-G2 GSE120104.TAF15.Hep-G2 105 bp overlap

ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 94 bp overlap

TARDBP 1 dataset

ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 158 bp overlap

TCF7L2 1 dataset

ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 157 bp overlap

TFAP2A 1 dataset

ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 158 bp overlap

TFAP2C 2 datasets

ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 158 bp overlap

ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 158 bp overlap

TFAP4 1 dataset

ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 132 bp overlap

TP63 1 dataset

ChIP breast-organoid GSE113909.TP63.breast-organoid 155 bp overlap

TRIM25 1 dataset

ChIP BT-549 GSE79588.TRIM25.BT-549 57 bp overlap

YY1 1 dataset

ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 158 bp overlap

ZBTB48 2 datasets

ChIP HEK293 ENCFF809BPK 58 bp overlap

ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 91 bp overlap

ZBTB7A 3 datasets

ChIP Ishikawa ENCFF191NFH 158 bp overlap

ChIP Ishikawa ENCFF191NFH 101 bp overlap

ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 158 bp overlap

ZBTB7B 1 dataset

ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 108 bp overlap

ZBTB8A 1 dataset

ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 101 bp overlap

ZNF276 1 dataset

ChIP Hep-G2 ENCSR076KLJ.ZNF276.Hep-G2 158 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 158 bp overlap