chr1 : 16,227,678 – 16,228,062
384 bp 71 TFs 3 linked genes
This 384 bp open chromatin element is linked to ANO7L1, ENSG00000288398, and CPLANE2 and is bound by 71 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ANO7L1 at TSS At TSS Proximity
ENSG00000288398 3.3 kb Proximal Proximity
CPLANE2 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:16,222,678 – 16,233,062
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AGO1 6 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 332 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 332 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 384 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 384 bp overlap
ChIP K562 ENCFF025NLP 384 bp overlap
ChIP K562 ENCFF025NLP 84 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 384 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 384 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 338 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 384 bp overlap
BRD4 6 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 384 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 218 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 228 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 283 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 361 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 360 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 222 bp overlap
CREB1 2 datasets
ChIP WA01 ENCSR000BSN.CREB1.WA01 124 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 113 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 255 bp overlap
CTCF 2 datasets
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 52 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 149 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 384 bp overlap
ChIP BLaER1 ENCFF274GAT 247 bp overlap
ChIP BLaER1 ENCFF364PUR 180 bp overlap
E2F6 2 datasets
ChIP WA01 ENCSR000BSI.E2F6.WA01 61 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 199 bp overlap
ERG 2 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 201 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 240 bp overlap
ESR1 3 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 253 bp overlap
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 330 bp overlap
ChIP NCI-H3396_ETOH GSE32349.ESR1.NCI-H3396_ETOH 307 bp overlap
EZH2 27 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 384 bp overlap
ChIP GM23248 ENCFF404ZHM 281 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 384 bp overlap
ChIP GM23338 ENCFF613YON 238 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 384 bp overlap
ChIP H1 ENCFF232NZA 113 bp overlap
ChIP H1 ENCFF232NZA 384 bp overlap
ChIP H1 ENCFF232NZA 384 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 384 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 246 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 353 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 105 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 384 bp overlap
ChIP astrocyte ENCFF365JTP 384 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 273 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 284 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 384 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 384 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 316 bp overlap
ChIP fibroblast of lung ENCFF479BAW 344 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 253 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 69 bp overlap
ChIP hESC GSE113817.EZH2.hESC 210 bp overlap
ChIP hepatocyte ENCFF552DZB 303 bp overlap
ChIP hepatocyte ENCFF552DZB 379 bp overlap
ChIP neural progenitor cell ENCFF018MKA 384 bp overlap
ChIP neural progenitor cell ENCFF472NFV 384 bp overlap
EZH2_phosphoT487 1 dataset
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 384 bp overlap
FIP1L1 3 datasets
ChIP K-562 ENCSR177DNR.FIP1L1.K-562 267 bp overlap
ChIP K562 ENCFF002WKI 384 bp overlap
ChIP K562 ENCFF363ZMN 384 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 226 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 163 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 146 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 89 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 249 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 185 bp overlap
IRF2 1 dataset
ChIP CD34_ADULT GSE70660.IRF2.CD34_ADULT 325 bp overlap
JARID2 4 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 384 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 233 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 337 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 160 bp overlap
JUN 3 datasets
ChIP 786-O GSE86092.JUN.786-O 114 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 321 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 113 bp overlap
KDM1A 3 datasets
ChIP H1 ENCFF696SGD 66 bp overlap
ChIP H1 ENCFF696SGD 272 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 216 bp overlap
KDM4A 2 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 187 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 245 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 237 bp overlap
MAZ 1 dataset
ChIP K562 ENCFF333ZIV 356 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 144 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 277 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 203 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 235 bp overlap
NSD2 1 dataset
ChIP K-562 ENCSR000AVE.NSD2.K-562 174 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 268 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 259 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 320 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 297 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 233 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 283 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 211 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 198 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 187 bp overlap
ChIP K562 ENCFF648YPL 272 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 384 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 201 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 292 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 132 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 384 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 384 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 218 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 218 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 381 bp overlap
RBFOX2 1 dataset
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 211 bp overlap
RBM22 1 dataset
ChIP K-562 GSE120104.RBM22.K-562 195 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 111 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 305 bp overlap
ChIP H1 ENCFF239FFS 384 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 384 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 384 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 384 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 359 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 384 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 189 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 192 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 256 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 205 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 315 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 353 bp overlap
SMARCA4 2 datasets
ChIP NCI-H1703 GSE121755.SMARCA4.NCI-H1703 346 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 200 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 189 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 299 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 298 bp overlap
STAG1 1 dataset
ChIP erythroid GSE67783.STAG1.erythroid 61 bp overlap
SUZ12 7 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 366 bp overlap
ChIP H1 ENCFF881NFR 342 bp overlap
ChIP H1 ENCFF881NFR 143 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 384 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 384 bp overlap
ChIP NT2/D1 ENCFF574SXS 384 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 384 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 293 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 300 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 211 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 384 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 357 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 266 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 336 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 308 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 76 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 384 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 91 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 366 bp overlap
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