chr7 : 116,367,316 – 116,367,735

419 bp 87 TFs 0 linked genes

This 419 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

87 transcription factors

AR 2 datasets

ChIP 22Rv1_shKDM3A GSE109748.AR.22Rv1_shKDM3A 133 bp overlap

ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 119 bp overlap

BRD2 2 datasets

ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 138 bp overlap

ChIP HUVEC-C GSE60171.BRD2.HUVEC-C 195 bp overlap

BRD4 5 datasets

ChIP HCT-116_JQ1 GSE57628.BRD4.HCT-116_JQ1 185 bp overlap

ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 303 bp overlap

ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 180 bp overlap

ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 390 bp overlap

ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 203 bp overlap

CBX3 2 datasets

ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 114 bp overlap

ChIP HCT116 ENCFF947BOL 279 bp overlap

CREBBP 3 datasets

ChIP MCF-7 ERP000901.CREBBP.MCF-7 132 bp overlap

ChIP PC-3 GSE147455.CREBBP.PC-3 127 bp overlap

ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 161 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 389 bp overlap

CTCF 4 datasets

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 233 bp overlap

ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 251 bp overlap

ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 167 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap

Crx 1 dataset

Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap

DPRX 1 dataset

Motif DE_12h DE_12h-DPRX_MA1480.2 9 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 59 bp overlap

EHF 1 dataset

ChIP primary-bronchial-epithelial GSE85401.EHF.primary-bronchial-epithelial 180 bp overlap

ELF3 3 datasets

ChIP PDAC GSE64557.ELF3.PDAC 419 bp overlap

ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 419 bp overlap

ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 419 bp overlap

EP300 1 dataset

ChIP PC-3 GSE147455.EP300.PC-3 128 bp overlap

ESR1 8 datasets

ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 189 bp overlap

ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 257 bp overlap

ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 231 bp overlap

ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 204 bp overlap

ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 180 bp overlap

ChIP ZR751 ERP000783.ESR1.ZR751 210 bp overlap

ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 169 bp overlap

ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 164 bp overlap

EZH2 1 dataset

ChIP DND41 ENCSR000ASW.EZH2.DND41 339 bp overlap

FOSL2 1 dataset

Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap

FOXA1 10 datasets

ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 419 bp overlap

ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 303 bp overlap

ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 307 bp overlap

ChIP PDAC GSE64557.FOXA1.PDAC 362 bp overlap

ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 338 bp overlap

ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 350 bp overlap

ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 160 bp overlap

ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 190 bp overlap

ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 302 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 127 bp overlap

FOXA2 3 datasets

ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 247 bp overlap

ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 311 bp overlap

ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 283 bp overlap

FOXM1 1 dataset

ChIP OE33 ERP013564.FOXM1.OE33 165 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 240 bp overlap

GATA1 1 dataset

Motif DE_12h DE_12h-GATA1_MA0035.5 7 bp overlap

GATA3 1 dataset

ChIP T-47D ENCSR000BMX.GATA3.T-47D 121 bp overlap

GRHL2 1 dataset

ChIP HBE GSE46194.GRHL2.HBE 296 bp overlap

GSC 1 dataset

Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap

HDAC2 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 196 bp overlap

HNF1B 1 dataset

ChIP PDAC GSE64557.HNF1B.PDAC 352 bp overlap

HNF4A 2 datasets

Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap

ChIP IM95 GSE114018.HNF4A.IM95 210 bp overlap

HOXB8 1 dataset

ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 248 bp overlap

IRF1 1 dataset

ChIP PDAC GSE64557.IRF1.PDAC 416 bp overlap

JUN 1 dataset

ChIP ESC S34-ESC-d0-JUN-exp2 330 bp overlap

KLF4 1 dataset

ChIP PDAC GSE64557.KLF4.PDAC 419 bp overlap

KLF6 1 dataset

ChIP PDAC GSE64557.KLF6.PDAC 303 bp overlap

MED1 1 dataset

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 175 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MYOD1 1 dataset

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 166 bp overlap

NANOG 2 datasets

ChIP WA09 GSE105028.NANOG.WA09 215 bp overlap

ChIP hESC GSE18292.NANOG.hESC 136 bp overlap

NCOA3 1 dataset

ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 146 bp overlap

NR1D1 1 dataset

Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap

NR1D2 1 dataset

Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap

NR3C1 2 datasets

ChIP HCC1937 GSE152203.NR3C1.HCC1937 168 bp overlap

ChIP HCC70 GSE152203.NR3C1.HCC70 215 bp overlap

NRIP1 1 dataset

ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 176 bp overlap

OTX1 1 dataset

Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap

PAX3-FOXO1 2 datasets

ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 177 bp overlap

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 196 bp overlap

PBX3 1 dataset

Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap

PITX1 1 dataset

Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap

PKNOX1 1 dataset

Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap

POLR2A 2 datasets

ChIP stomach ENCFF607ZPU 203 bp overlap

ChIP stomach ENCFF820WZN 121 bp overlap

POU1F1 1 dataset

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

POU2F1 1 dataset

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 1 dataset

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

POU3F1 1 dataset

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

POU3F2 1 dataset

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

POU3F4 1 dataset

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

POU5F1 9 datasets

ChIP BG03 GSE21614.POU5F1.BG03 154 bp overlap

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 419 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 308 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 200 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 256 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 336 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 261 bp overlap

POU5F1B 1 dataset

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAD21 2 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 190 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 279 bp overlap

RARA::RXRG 1 dataset

Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 216 bp overlap

RELA 5 datasets

ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 226 bp overlap

ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 259 bp overlap

ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 376 bp overlap

ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 256 bp overlap

ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 286 bp overlap

REST 1 dataset

ChIP hippocampus GSE144226.REST.hippocampus 233 bp overlap

RHOXF1 1 dataset

Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap

SETX 1 dataset

ChIP A-549_Influenza_PR8_NS1 GSE52936.SETX.A-549_Influenza_PR8_NS1 207 bp overlap

SMAD2 1 dataset

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

SMAD3 3 datasets

ChIP HCC1954 GSE104760.SMAD3.HCC1954 308 bp overlap

ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 305 bp overlap

ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 173 bp overlap

SMAD3-HIF1A 1 dataset

ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 95 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 227 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 308 bp overlap

SNAI2 1 dataset

ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 244 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 126 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 356 bp overlap

SPIB 2 datasets

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 291 bp overlap

STAT3 4 datasets

ChIP HCC1187 GSE152203.STAT3.HCC1187 391 bp overlap

ChIP HCC70 GSE152203.STAT3.HCC70 232 bp overlap

ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 223 bp overlap

ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 256 bp overlap

Sox6 1 dataset

Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 224 bp overlap

TFAP2C 1 dataset

ChIP HCC1954 GSE126897.TFAP2C.HCC1954 330 bp overlap

YY1 2 datasets

ChIP HCT116 ENCFF497ZQZ 112 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 112 bp overlap

YY1AP1 1 dataset

ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 244 bp overlap

ZNF24 1 dataset

Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap

ZNF460 1 dataset

Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 139 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap