chr6 : 128,580,226 – 128,580,988
762 bp 65 TFs 1 linked gene
This 762 bp open chromatin element is linked to EEF1DP5 and is bound by 65 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
EEF1DP5 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:128,575,226 – 128,585,988
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 318 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 304 bp overlap
AR 5 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 276 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 366 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 101 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 298 bp overlap
BRD2 8 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 331 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 746 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 762 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 358 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 485 bp overlap
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 432 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 529 bp overlap
ChIP SUM149PT_R_JQ1 GSE131097.BRD2.SUM149PT_R_JQ1 217 bp overlap
BRD4 11 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 514 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 713 bp overlap
ChIP HCC1395_JQ1 GSE63581.BRD4.HCC1395_JQ1 210 bp overlap
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 348 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 440 bp overlap
ChIP HCC1806_DMSO_24h GSE87418.BRD4.HCC1806_DMSO_24h 411 bp overlap
ChIP HCC1937 GSE124748.BRD4.HCC1937 696 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 193 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 242 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 216 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 282 bp overlap
CTCF 4 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 183 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 391 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 224 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 162 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 461 bp overlap
DDX5 1 dataset
ChIP BT-549 GSE112961.DDX5.BT-549 226 bp overlap
EHF 1 dataset
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ERG 3 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 219 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 233 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 391 bp overlap
ESR1 8 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 207 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 300 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 261 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 189 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 390 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 330 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 248 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 385 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 279 bp overlap
EZH2 1 dataset
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 458 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 204 bp overlap
FOSL1 2 datasets
ChIP BT-549 GSE112961.FOSL1.BT-549 509 bp overlap
ChIP BT-549 GSE46166.FOSL1.BT-549 339 bp overlap
FOXA1 3 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 494 bp overlap
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 233 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 301 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 136 bp overlap
JUN 1 dataset
ChIP BT-549 GSE46166.JUN.BT-549 308 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 185 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 131 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 431 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 329 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 198 bp overlap
MYC 1 dataset
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 152 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 78 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 58 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 187 bp overlap
NR3C1 3 datasets
ChIP HCC1937 GSE152203.NR3C1.HCC1937 170 bp overlap
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.NR3C1.HeLa-B2_P65KD_TA_TNFA 93 bp overlap
ChIP HeLa-B2_TA_TNFA GSE24518.NR3C1.HeLa-B2_TA_TNFA 160 bp overlap
NRF1 1 dataset
ChIP HCC1954 GSE67867.NRF1.HCC1954 228 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 435 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 386 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 330 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 385 bp overlap
OLIG2 2 datasets
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 241 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 238 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 163 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 413 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 194 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 256 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 170 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 170 bp overlap
Prdm5 1 dataset
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 140 bp overlap
RBPJ 4 datasets
ChIP HCC1599 GSE116871.RBPJ.HCC1599 655 bp overlap
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 671 bp overlap
ChIP MDA-MB-157 GSE116868.RBPJ.MDA-MB-157 485 bp overlap
ChIP MDA-MB-157_GSI GSE116868.RBPJ.MDA-MB-157_GSI 505 bp overlap
RELA 2 datasets
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 395 bp overlap
ChIP HeLa-B2_TA_TNFA GSE24518.RELA.HeLa-B2_TA_TNFA 175 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 244 bp overlap
Runx1 1 dataset
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 321 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 264 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 275 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 304 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 54 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 211 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 72 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 72 bp overlap
STAT3 10 datasets
ChIP A139 GSE85579.STAT3.A139 275 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 310 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 275 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 139 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 153 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 144 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 587 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 345 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 147 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 317 bp overlap
TBL1X 2 datasets
ChIP HEK293T GSE35197.TBL1X.HEK293T 254 bp overlap
ChIP HEK293T GSE35197.TBL1X.HEK293T 263 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 324 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 344 bp overlap
TEAD4 6 datasets
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 236 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 214 bp overlap
ChIP MCF-7_ICI GSE125594.TEAD4.MCF-7_ICI 235 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 148 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 256 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 423 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 290 bp overlap
TP63 1 dataset
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 101 bp overlap
YY1 1 dataset
ChIP HEK293T_control GSE128106.YY1.HEK293T_control 380 bp overlap
YY1AP1 1 dataset
ChIP MCF-7_Veh GSE125594.YY1AP1.MCF-7_Veh 241 bp overlap
ZBTB11 1 dataset
Motif ES_0h ES_0h-ZBTB11_MA2329.1 9 bp overlap
ZBTB26 1 dataset
Motif ES_0h ES_0h-ZBTB26_MA1579.2 8 bp overlap
ZBTB7A 2 datasets
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 344 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 281 bp overlap
ZNF135 1 dataset
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 251 bp overlap
ZNF737 1 dataset
ChIP Hep-G2 ENCSR127IHN.ZNF737.Hep-G2 506 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 202 bp overlap
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