chr6 : 101,207,689 101,208,586
897 bp 109 TFs 0 linked genes
This 897 bp open chromatin element has no linked target genes and is bound by 109 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:101,202,689 – 101,213,586
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
ATF4 2 datasets
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Motif DE_24h DE_24h-ATF4_MA0833.3 10 bp overlap
Ar 2 datasets
Motif DE_12h DE_12h-Ar_MA0007.4 16 bp overlap
Motif DE_24h DE_24h-Ar_MA0007.4 16 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CDX2 6 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 253 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 162 bp overlap
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 345 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 412 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 340 bp overlap
CDX4 1 dataset
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 305 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
E2F7 2 datasets
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
Motif DE_24h DE_24h-E2F7_MA0758.1 14 bp overlap
E2F8 2 datasets
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
EOMES 3 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 157 bp overlap
EP300 3 datasets
ChIP neural ENCSR843ZUP.EP300.neural 399 bp overlap
ChIP neural cell ENCFF442QNK 243 bp overlap
ChIP transverse colon ENCFF258CAS 241 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 202 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXA1 3 datasets
ChIP Huh-7_ASYNC GSE39241.FOXA1.Huh-7_ASYNC 138 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 383 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 340 bp overlap
FOXA2 5 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 324 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 251 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 421 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 355 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 251 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GRHL1 2 datasets
Motif DE_12h DE_12h-GRHL1_MA0647.2 10 bp overlap
Motif DE_12h DE_12h-GRHL1_MA0647.2 10 bp overlap
GRHL2 2 datasets
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
HNF4A 13 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 364 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 129 bp overlap
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 509 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 144 bp overlap
ChIP HepG2 ENCFF146SSF 361 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 283 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 516 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 317 bp overlap
ChIP liver ENCFF354NRH 405 bp overlap
ChIP liver ENCFF449HPV 441 bp overlap
HNF4G 3 datasets
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXB13 2 datasets
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 155 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hoxa13 1 dataset
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_12h DE_12h-Hoxd13_MA0909.4 7 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 176 bp overlap
MED1 1 dataset
ChIP LS180 GSE39277.MED1.LS180 159 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
NCOA1 1 dataset
ChIP LS180_125 GSE39277.NCOA1.LS180_125 118 bp overlap
NCOR1 2 datasets
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
ChIP LS180_125 GSE39277.NCOR1.LS180_125 182 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 100 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 341 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 359 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nr2f6 1 dataset
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
PDX1 2 datasets
ChIP hESC GSE58685.PDX1.hESC 285 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 208 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 391 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 281 bp overlap
POLR2A 3 datasets
ChIP neural cell ENCFF604SPB 385 bp overlap
ChIP transverse colon ENCFF607LKE 371 bp overlap
ChIP transverse colon ENCFF610RWV 324 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 286 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PPARG 3 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 477 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 526 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 212 bp overlap
Pgr 2 datasets
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
Motif DE_24h DE_24h-Pgr_MA2323.1 17 bp overlap
Pparg::Rxra 2 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 502 bp overlap
RARA 3 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
REST 2 datasets
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 272 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 297 bp overlap
RFX2 1 dataset
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
RFX4 1 dataset
Motif DE_12h DE_12h-RFX4_MA0799.3 13 bp overlap
RFX5 1 dataset
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
RFX7 3 datasets
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
Motif DE_24h DE_24h-RFX7_MA1554.2 8 bp overlap
RXR 2 datasets
ChIP LS180 GSE31939.RXR.LS180 209 bp overlap
ChIP LS180_125 GSE31939.RXR.LS180_125 268 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 465 bp overlap
ChIP liver ENCFF807CIA 451 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 224 bp overlap
SMARCA4 4 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 897 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 897 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 897 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 268 bp overlap
SMARCB1 1 dataset
ChIP TTC-1240_R377H GSE124903.SMARCB1.TTC-1240_R377H 586 bp overlap
SMARCC1 5 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 897 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 897 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 897 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 897 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 897 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 194 bp overlap
TBR1 2 datasets
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX18 2 datasets
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX20 2 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX3 2 datasets
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TFCP2 2 datasets
Motif DE_12h DE_12h-TFCP2_MA1968.2 9 bp overlap
Motif DE_12h DE_12h-TFCP2_MA1968.2 9 bp overlap
TFDP1 2 datasets
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
Motif DE_24h DE_24h-TFDP1_MA1122.2 8 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
VDR 1 dataset
ChIP LS180_125 GSE31939.VDR.LS180_125 362 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap