chr6 : 98,627,084 98,627,676
592 bp 124 TFs 0 linked genes
This 592 bp open chromatin element has no linked target genes and is bound by 124 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:98,622,084 – 98,632,676
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
124 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 378 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 588 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 161 bp overlap
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
Ascl2 1 dataset
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BCL11A 2 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 196 bp overlap
BHLHE22 2 datasets
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
Bcl11B 1 dataset
Motif ES_0h ES_0h-Bcl11B_MA1989.2 9 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 146 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 135 bp overlap
CHD7 5 datasets
ChIP H1 ENCFF126NLU 507 bp overlap
ChIP H1 ENCFF126NLU 440 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 143 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 168 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 357 bp overlap
CTCF 2 datasets
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 271 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
DUXA 1 dataset
Motif ES_0h ES_0h-DUXA_MA0884.2 13 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dux 2 datasets
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap
EN2 1 dataset
Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 165 bp overlap
ETV6 1 dataset
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 165 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 227 bp overlap
FERD3L 1 dataset
Motif ES_0h ES_0h-FERD3L_MA1485.1 14 bp overlap
FOXB1 2 datasets
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif ES_0h ES_0h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif ES_0h ES_0h-FOXE1_MA1487.3 12 bp overlap
FOXH1 1 dataset
Motif ES_0h ES_0h-FOXH1_MA0479.2 8 bp overlap
Foxj2 1 dataset
Motif ES_0h ES_0h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif ES_0h ES_0h-Foxj3_MA0851.2 9 bp overlap
GBX1 1 dataset
Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 350 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 154 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB13 1 dataset
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
Hmx1 1 dataset
Motif ES_0h ES_0h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif ES_0h ES_0h-Hmx2_MA0897.2 15 bp overlap
Hnf1A 1 dataset
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
IRF2 1 dataset
Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap
IRF4 1 dataset
Motif ES_0h ES_0h-IRF4_MA1419.2 14 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 388 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 318 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 89 bp overlap
LBX1 1 dataset
Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap
LIN54 1 dataset
Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap
Lef1 1 dataset
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 179 bp overlap
MEF2D 1 dataset
Motif ES_0h ES_0h-MEF2D_MA0773.1 12 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
MXI1 1 dataset
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
MYOG 1 dataset
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
Mecom 1 dataset
Motif ES_0h ES_0h-Mecom_MA0029.2 11 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 151 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 592 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 590 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 356 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 279 bp overlap
ChIP hESC GSE18292.NANOG.hESC 123 bp overlap
NFIA 1 dataset
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
NHLH1 1 dataset
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NR2F1 1 dataset
Motif ES_0h ES_0h-NR2F1_MA1538.1 15 bp overlap
NR2F6 1 dataset
Motif ES_0h ES_0h-NR2F6_MA1539.1 15 bp overlap
Neurod2 2 datasets
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
Nr2e3 2 datasets
Motif ES_0h ES_0h-Nr2e3_MA0164.2 6 bp overlap
Motif ES_0h ES_0h-Nr2e3_MA0164.2 6 bp overlap
Olig2 2 datasets
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PHOX2A 1 dataset
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
POU2F1 1 dataset
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F3 2 datasets
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 230 bp overlap
POU3F4 2 datasets
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 7 datasets
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 592 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 509 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 129 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 447 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 313 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 202 bp overlap
PRRX2 1 dataset
Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 580 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 472 bp overlap
RBPJ 3 datasets
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 491 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 489 bp overlap
RORA 1 dataset
Motif ES_0h ES_0h-RORA_MA0072.2 11 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 204 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 214 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 140 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 177 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 305 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 503 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 592 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 211 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 525 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 360 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 227 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 561 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX13 1 dataset
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX2 5 datasets
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 489 bp overlap
ChIP hESC GSE18292.SOX2.hESC 98 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 517 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 284 bp overlap
SPIC 1 dataset
Motif ES_0h ES_0h-SPIC_MA0687.2 13 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 121 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
Stat2 1 dataset
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TCF12 3 datasets
ChIP H1 ENCFF203EBH 196 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 149 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 256 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 471 bp overlap
TCF7L2 1 dataset
Motif ES_0h ES_0h-TCF7L2_MA0523.2 9 bp overlap
TP53 2 datasets
ChIP H9 GSE39912.TP53.H9 248 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 215 bp overlap
Tcf12 2 datasets
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Thap11 1 dataset
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
Twist2 2 datasets
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
YAP1 1 dataset
ChIP hiPSC GSE111930.YAP1.hiPSC 119 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 165 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 273 bp overlap
ZNF24 1 dataset
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF257 1 dataset
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF582 1 dataset
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF707 1 dataset
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF75A 1 dataset
Motif ES_0h ES_0h-ZNF75A_MA2097.1 12 bp overlap
ZNF93 1 dataset
Motif ES_0h ES_0h-ZNF93_MA1721.2 14 bp overlap
ZSCAN4 1 dataset
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap