chr5 : 148,659,968 – 148,660,759
791 bp 80 TFs 1 linked gene
This 791 bp open chromatin element is linked to HTR4 and is bound by 80 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HTR4 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:148,654,968 – 148,665,759
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 192 bp overlap
ChIP K562 ENCFF938UXQ 101 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 148 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 211 bp overlap
ATF2 3 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 235 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 435 bp overlap
ChIP K562 ENCFF139ZZG 248 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 315 bp overlap
ChIP K562 ENCFF604FPV 150 bp overlap
ATF7 2 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 453 bp overlap
ChIP K562 ENCFF308SKS 185 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 511 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 172 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 132 bp overlap
BRD4 6 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 496 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 623 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 174 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 225 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 238 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 145 bp overlap
CBFA2T2 1 dataset
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 174 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 601 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 136 bp overlap
ChIP K562 ENCFF673OEZ 102 bp overlap
CBX3 1 dataset
ChIP K562 ENCFF410AQU 74 bp overlap
CC2D1A 1 dataset
ChIP K562 ENCFF567XUT 139 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 128 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 282 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 573 bp overlap
CTCF 1 dataset
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 168 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF739JDE 98 bp overlap
ChIP K562 ENCFF775HUO 64 bp overlap
EBF3_P177L 1 dataset
ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 208 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 243 bp overlap
ChIP K562 ENCFF053BWO 211 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 220 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 183 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
EZH2 4 datasets
ChIP HCT116 ENCFF091OIM 465 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 275 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 192 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 194 bp overlap
EZH2_phosphoT487 2 datasets
ChIP HCT-116 ENCSR429CLV.EZH2_phosphoT487.HCT-116 617 bp overlap
ChIP PC-3 ENCSR617RSQ.EZH2_phosphoT487.PC-3 435 bp overlap
FOXA1 1 dataset
ChIP K562 ENCFF954GIJ 59 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 771 bp overlap
ChIP DE DE-FOXA2-2 756 bp overlap
FOXA3 2 datasets
ChIP K562 ENCFF348SOM 98 bp overlap
ChIP K562 ENCFF781VSC 61 bp overlap
FOXK2 3 datasets
ChIP K-562 ENCSR302AWT.FOXK2.K-562 102 bp overlap
ChIP K-562 ENCSR508DQA.FOXK2.K-562 142 bp overlap
ChIP K562 ENCFF245WKP 59 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 159 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 214 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 225 bp overlap
GATA2 5 datasets
ChIP K562 ENCFF088XQT 101 bp overlap
ChIP SH-SY5Y ENCFF485YIB 405 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 325 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 176 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 764 bp overlap
ChIP DE DE-GATA4-2 781 bp overlap
ChIP foregut GSE117136.GATA4.foregut 524 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 734 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 59 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 470 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 171 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 154 bp overlap
ChIP DE DE-GATA6-1 791 bp overlap
ChIP DE DE-GATA6-2 791 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 774 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 305 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 466 bp overlap
ChIP foregut GSE117136.GATA6.foregut 599 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 443 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 736 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 311 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 436 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 263 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 142 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
ChIP K562 ENCFF968WBH 100 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 209 bp overlap
ChIP K562 ENCFF919OMP 163 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 75 bp overlap
ChIP K562 ENCFF348IBL 74 bp overlap
ChIP K562 ENCFF771OHZ 163 bp overlap
ILK 1 dataset
ChIP K-562 ENCSR648INT.ILK.K-562 282 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 109 bp overlap
KDM1A 5 datasets
ChIP K-562 GSE117944.KDM1A.K-562 472 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 201 bp overlap
ChIP K562 ENCFF128TYE 75 bp overlap
ChIP K562 ENCFF133OLU 53 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 256 bp overlap
KLF16 1 dataset
ChIP K562 ENCFF464PIV 109 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 654 bp overlap
LEF1 2 datasets
ChIP K562 ENCFF198WCP 75 bp overlap
ChIP K562 ENCFF198WCP 295 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 70 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 203 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 184 bp overlap
NCOA1 2 datasets
ChIP K562 ENCFF395XLS 129 bp overlap
ChIP K562 ENCFF962VHQ 254 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 168 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 148 bp overlap
NR2F2 1 dataset
ChIP K562 ENCFF004YPK 80 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF286KMN 64 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 396 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 371 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 220 bp overlap
ChIP K562 ENCFF236IUS 57 bp overlap
PML 1 dataset
ChIP K562 ENCFF801LKH 125 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 122 bp overlap
RAD21 1 dataset
ChIP K562 ENCFF634XYR 87 bp overlap
RBBP4 2 datasets
ChIP SCMC GSE155861.RBBP4.SCMC 160 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 231 bp overlap
RBBP5 1 dataset
ChIP K-562 ENCSR000AQI.RBBP5.K-562 130 bp overlap
RCOR1 2 datasets
ChIP K562 ENCFF721RTS 55 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 221 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 398 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 548 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 591 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 157 bp overlap
ChIP K562 ENCFF316MCJ 237 bp overlap
SMARCC2 1 dataset
ChIP K562 ENCFF368GSR 72 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 222 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 416 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 774 bp overlap
SOX6 3 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 67 bp overlap
ChIP K-562 ENCSR788RSW.SOX6.K-562 230 bp overlap
ChIP K562 ENCFF059YCJ 120 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 81 bp overlap
TAL1 7 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 154 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 126 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 129 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 102 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 50 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 54 bp overlap
ChIP K562 ENCFF620GMX 63 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 83 bp overlap
ChIP K562 ENCFF909RDY 129 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 230 bp overlap
ChIP K-562 ENCSR970OJY.TCF3.K-562 168 bp overlap
TRIM24 3 datasets
ChIP K562 ENCFF284DKY 89 bp overlap
ChIP K562 ENCFF616RIL 126 bp overlap
ChIP K562 ENCFF616RIL 339 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 152 bp overlap
ZEB2 3 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 504 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 504 bp overlap
ChIP K562 ENCFF795CMH 146 bp overlap
ZMIZ1 1 dataset
ChIP K562 ENCFF647WJV 64 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR099NCH.ZNF24.K-562 77 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 125 bp overlap
ZNF700 1 dataset
ChIP K-562 ENCSR959BQO.ZNF700.K-562 76 bp overlap
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