chr5 : 117,096,144 117,096,331
187 bp 86 TFs 0 linked genes
This 187 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:117,091,144 – 117,101,331
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
AR 5 datasets
ChIP 22Rv1_Crispr_WT3 GSE123618.AR.22Rv1_Crispr_WT3 187 bp overlap
ChIP 22Rv1_V5 GSE123618.AR.22Rv1_V5 74 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 108 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 118 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 187 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BCL6B 2 datasets
ChIP HEK293 ENCFF555YRB 187 bp overlap
ChIP HEK293 ENCSR673SGK.BCL6B.HEK293 138 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 187 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 184 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 121 bp overlap
BRD4 4 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 178 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 147 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 69 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 187 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 187 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 132 bp overlap
ESR1 1 dataset
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 59 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 187 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 187 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 187 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 187 bp overlap
FOXA1 22 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 187 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 187 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 51 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 187 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 130 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 57 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 67 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 134 bp overlap
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 77 bp overlap
ChIP 22Rv1_ab GSE129951.FOXA1.22Rv1_ab 187 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 84 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 187 bp overlap
ChIP HEK293_i176m_TFS GSE123618.FOXA1.HEK293_i176m_TFS 57 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 187 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 90 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 187 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 106 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 91 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 139 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 103 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 65 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 102 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 61 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 176 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 187 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 187 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 162 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GLI4 1 dataset
ChIP HEK293 GSE76494.GLI4.HEK293 105 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCFF252CFL 187 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 52 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 187 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 187 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 127 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 56 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MAX 1 dataset
ChIP MDA-MB-468 GSE81381.MAX.MDA-MB-468 126 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 91 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 187 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 187 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 187 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 187 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 95 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 70 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF833NJP 187 bp overlap
ChIP neural cell ENCFF604SPB 166 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 187 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 187 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 113 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 187 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 187 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 187 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 99 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 118 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 114 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 187 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 187 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 187 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 187 bp overlap
ChIP neural cell ENCFF882LXX 187 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 99 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 72 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 187 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 187 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 187 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 113 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 187 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 187 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 187 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 107 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 187 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 187 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 180 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 138 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 178 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 187 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 187 bp overlap
TEAD4 1 dataset
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 164 bp overlap
TLE3 1 dataset
ChIP 22Rv1 GSE123618.TLE3.22Rv1 58 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 151 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 66 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 72 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 119 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 82 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 153 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 129 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 187 bp overlap
ZBTB20 3 datasets
ChIP HEK293 ENCFF524ADK 187 bp overlap
ChIP HEK293 ENCFF524ADK 153 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 187 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 187 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 187 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 187 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 187 bp overlap
ZNF121 1 dataset
ChIP HEK293 GSE76494.ZNF121.HEK293 155 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 102 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 63 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 169 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 53 bp overlap
ZNF37A 1 dataset
ChIP HEK293 ENCFF953IYO 120 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 171 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF549 2 datasets
ChIP HEK293 ENCFF528IUI 187 bp overlap
ChIP HEK293 ENCFF565EYY 187 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCFF778UKJ 51 bp overlap
ZNF716 1 dataset
ChIP HEK293T GSE78099.ZNF716.HEK293T 187 bp overlap
ZSCAN30 2 datasets
ChIP HEK293 ENCFF082YBI 56 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 54 bp overlap