chr5 : 61,328,901 – 61,329,369
468 bp 77 TFs 2 linked genes
This 468 bp open chromatin element is linked to ENSG00000288936 and ZSWIM6 and is bound by 77 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000288936 2.5 kb Proximal Proximity
ZSWIM6 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:61,323,901 – 61,334,369
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 342 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 468 bp overlap
BHLHE40 1 dataset
ChIP A549 ENCFF980EQQ 182 bp overlap
BMI1 2 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 121 bp overlap
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 468 bp overlap
BRD2 3 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 191 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 121 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 108 bp overlap
BRD4 2 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 104 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 419 bp overlap
CBX2 1 dataset
ChIP K562 ENCFF578AQI 363 bp overlap
CBX8 2 datasets
ChIP K-562_HS GSE121182.CBX8.K-562_HS 234 bp overlap
ChIP K562 ENCFF485TBL 164 bp overlap
CTCF 1 dataset
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 190 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 345 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 155 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 117 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 427 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 172 bp overlap
ETV6 1 dataset
ChIP Reh_pCCL-ETV6-HA GSE102785.ETV6.Reh_pCCL-ETV6-HA 184 bp overlap
EZH2 5 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 85 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 109 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 146 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 198 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 264 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 316 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 301 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 267 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 273 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 307 bp overlap
FOXA1 5 datasets
ChIP PDAC GSE64557.FOXA1.PDAC 89 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 138 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 151 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 138 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 316 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 155 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 202 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 253 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 423 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 243 bp overlap
ChIP DE DE-GATA6-2 269 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 265 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 263 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 386 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 468 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 412 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 276 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 346 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 203 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 348 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 461 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 146 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 221 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 326 bp overlap
JARID2 3 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 468 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 203 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 223 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 449 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 443 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 326 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 62 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 221 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 297 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 297 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 319 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 121 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 271 bp overlap
MED1 4 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 109 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 233 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 262 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 288 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 153 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 367 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 231 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 155 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 328 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 177 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 236 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 356 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 196 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 271 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 200 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 335 bp overlap
RELA 2 datasets
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 286 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 71 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 397 bp overlap
REST 1 dataset
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 125 bp overlap
RNF2 11 datasets
ChIP H1 ENCFF239FFS 433 bp overlap
ChIP H1 ENCFF239FFS 234 bp overlap
ChIP HepG2 ENCFF737WCD 66 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 114 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 468 bp overlap
ChIP K562 ENCFF022XJR 104 bp overlap
ChIP K562 ENCFF022XJR 70 bp overlap
ChIP K562 ENCFF130DMJ 150 bp overlap
ChIP K562 ENCFF653BQJ 468 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 468 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 100 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 134 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 468 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 468 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 468 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 468 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 468 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 122 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 195 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 437 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 274 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 468 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 245 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 165 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 225 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 171 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 158 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 153 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 267 bp overlap
ZBTB20 3 datasets
ChIP HEK293 ENCFF524ADK 148 bp overlap
ChIP HEK293 ENCFF524ADK 83 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 396 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 375 bp overlap
ZFP36 1 dataset
ChIP K562 ENCFF255RZG 109 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 132 bp overlap
ZFX 1 dataset
ChIP C4-2B ENCFF652WZM 424 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 468 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 434 bp overlap
ZNF207 1 dataset
ChIP GM12878 ENCSR117KWH.ZNF207.GM12878 107 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 442 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 60 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 224 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 119 bp overlap
ZNF600 2 datasets
ChIP HEK293 ENCFF785JSX 191 bp overlap
ChIP HEK293 ENCFF785JSX 344 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 297 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 176 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCFF374TCG 90 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 193 bp overlap
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