chr4 : 186,247,072 – 186,247,616
544 bp 94 TFs 0 linked genes
This 544 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:186,242,072 – 186,252,616
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 445 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 445 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 150 bp overlap
ATF3 1 dataset
Motif DE_12h DE_12h-ATF3_MA0605.3 10 bp overlap
ATF7 1 dataset
Motif DE_12h DE_12h-ATF7_MA0834.2 10 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
BCL6B 2 datasets
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
Motif DE_24h DE_24h-BCL6B_MA0731.1 17 bp overlap
CEBPA 1 dataset
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
CHD1 3 datasets
ChIP H1 ENCFF998XEK 281 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 176 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 126 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 117 bp overlap
CREB3 1 dataset
Motif DE_12h DE_12h-CREB3_MA0638.2 12 bp overlap
CREM 1 dataset
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
Creb5 1 dataset
Motif DE_12h DE_12h-Creb5_MA0840.2 10 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
FOSB::JUN 1 dataset
Motif DE_12h DE_12h-FOSBJUN_MA1127.1 11 bp overlap
FOSB::JUNB 1 dataset
Motif DE_12h DE_12h-FOSBJUNB_MA1136.1 10 bp overlap
FOSL1::JUN 1 dataset
Motif DE_12h DE_12h-FOSL1JUN_MA1129.1 10 bp overlap
FOSL2::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL2JUNB_MA1139.2 10 bp overlap
FOSL2::JUND 1 dataset
Motif DE_12h DE_12h-FOSL2JUND_MA1145.2 10 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 354 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 337 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 239 bp overlap
Gli2 1 dataset
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HOXB13 2 datasets
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 2 datasets
Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap
Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 277 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 307 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 468 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 277 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 242 bp overlap
JUN::JUNB 1 dataset
Motif DE_12h DE_12h-JUNJUNB_MA1133.2 11 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA1140.3 11 bp overlap
KLF1 3 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
KLF10 3 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
KLF14 3 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
KLF2 3 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF4 3 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 3 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 82 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 1 dataset
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 237 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 182 bp overlap
NEUROD1 1 dataset
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
NFATC4 2 datasets
Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap
Motif DE_24h DE_24h-NFATC4_MA1525.3 9 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Nfat5 2 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
Nr1h3::Rxra 1 dataset
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PATZ1 3 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PHF8 1 dataset
ChIP H1 ENCFF427UFV 445 bp overlap
POLR2A 5 datasets
ChIP GM23338 ENCFF450WCS 336 bp overlap
ChIP H1 ENCFF566JSR 370 bp overlap
ChIP H1 ENCFF566JSR 186 bp overlap
ChIP H1 ENCFF770YBQ 394 bp overlap
ChIP H1 ENCFF833NJP 312 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 332 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 168 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
RELA 1 dataset
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 87 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 151 bp overlap
SP4 2 datasets
ChIP H1 ENCFF473YOB 135 bp overlap
ChIP H1 ENCFF473YOB 364 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TAF1 4 datasets
ChIP H1 ENCFF478SZO 300 bp overlap
ChIP H1 ENCFF478SZO 137 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 256 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 153 bp overlap
TAF7 3 datasets
ChIP H1 ENCFF061XZZ 263 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 153 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 117 bp overlap
TBP 5 datasets
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
Motif DE_24h DE_24h-TBP_MA0108.3 7 bp overlap
ChIP H1 ENCFF859IIO 95 bp overlap
ChIP H1 ENCFF859IIO 289 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 147 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WTC11 ENCFF699QGS 410 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 148 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF512 1 dataset
ChIP WTC11 ENCFF086TTM 392 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF784 2 datasets
Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap
Motif DE_24h DE_24h-ZNF784_MA1717.2 8 bp overlap
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