chr4 : 68,372,424 – 68,373,052
628 bp 115 TFs 2 linked genes
This 628 bp open chromatin element is linked to MT2P1 and ENSG00000289942 and is bound by 115 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MT2P1 3.3 kb Proximal Proximity
ENSG00000289942 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:68,367,424 – 68,378,052
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
115 transcription factors
Source
Cell type
AR 1 dataset
ChIP fibroblast_prostate-cancer_PCDF2 GSE126852.AR.fibroblast_prostate-cancer_PCDF2 206 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 449 bp overlap
ChIP HAP1 GSE108387.ARID1A.HAP1 311 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 474 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 311 bp overlap
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 2 datasets
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
Motif DE_12h DE_12h-BACH2_MA1470.2 19 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 1 dataset
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 308 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD2 1 dataset
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 348 bp overlap
BRD4 13 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 458 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 564 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 564 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 287 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 202 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 284 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 287 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 259 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 233 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 463 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 253 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 290 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 447 bp overlap
Bach1::Mafk 1 dataset
Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 323 bp overlap
ChIP K562 ENCFF673OEZ 411 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 253 bp overlap
CEBPB 4 datasets
ChIP HeLa-S3 ENCFF722WEG 265 bp overlap
ChIP IMR-90 ENCFF468UGY 132 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 172 bp overlap
ChIP K562 ENCFF584CTB 495 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CHD1 1 dataset
ChIP IMR-90 ENCSR000EFC.CHD1.IMR-90 140 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 268 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
ETV5::HOXA2 1 dataset
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 177 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 1 dataset
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 1 dataset
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 1 dataset
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 3 datasets
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 473 bp overlap
ChIP K562 ENCFF455MKD 353 bp overlap
FOSL1::JUN 1 dataset
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL1::JUND 1 dataset
Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOSL2::JUN 1 dataset
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 1 dataset
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 117 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 66 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 255 bp overlap
ChIP erythroblast ENCFF867JAR 588 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 501 bp overlap
GATA1::TAL1 2 datasets
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 311 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 244 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 287 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 301 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 355 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
HOXA5 1 dataset
Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 477 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 577 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 601 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 492 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 440 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 456 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 596 bp overlap
JUN::JUNB 1 dataset
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 3 datasets
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 225 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 146 bp overlap
JUND 3 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 122 bp overlap
ChIP K562 ENCFF830LVJ 281 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 264 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAF::NFE2 1 dataset
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
MAFG::NFE2L1 1 dataset
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 220 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 215 bp overlap
MGA::EVX1 1 dataset
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 5 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 136 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 628 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 523 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 462 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 214 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 393 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
PAX4 1 dataset
Motif DE_12h DE_12h-PAX4_MA0068.2 8 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU5F1 6 datasets
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 628 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 184 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 205 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 227 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 143 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Pgr 1 dataset
Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RNF2 4 datasets
ChIP K-562 ENCSR076YPO.RNF2.K-562 138 bp overlap
ChIP K562 ENCFF061ATI 392 bp overlap
ChIP K562 ENCFF653BQJ 518 bp overlap
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 226 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 188 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 259 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 426 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 609 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 624 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 613 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 628 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 539 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 603 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 252 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP OSKM GSE81899.SOX2.OSKM 140 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SPI1 3 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 221 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 199 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Smad4 1 dataset
Motif DE_12h DE_12h-Smad4_MA1153.2 7 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TAL1 3 datasets
ChIP K-562 GSE107726.TAL1.K-562 231 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 145 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 173 bp overlap
TCF12 1 dataset
ChIP K-562 ENCSR744WOO.TCF12.K-562 190 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 196 bp overlap
ChIP K562 ENCFF319QZT 381 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 284 bp overlap
TEF 1 dataset
Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap
TP63 1 dataset
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 239 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF143 1 dataset
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF784 1 dataset
Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap
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