chr3 : 73,558,573 73,558,927
354 bp 77 TFs 0 linked genes
This 354 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:73,553,573 – 73,563,927
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AR 31 datasets
ChIP LNCaP GSE85558.AR.LNCaP 232 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 199 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 145 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 145 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 311 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 354 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 354 bp overlap
ChIP LNCaP_1F5 GSE30623.AR.LNCaP_1F5 151 bp overlap
ChIP LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h GSE89938.AR.LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h 216 bp overlap
ChIP LNCaP_DHT GSE83860.AR.LNCaP_DHT 147 bp overlap
ChIP LNCaP_DHT24H GSE58428.AR.LNCaP_DHT24H 245 bp overlap
ChIP LNCaP_DHT_TNFA GSE83860.AR.LNCaP_DHT_TNFA 158 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 307 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 188 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 113 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 157 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 243 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 264 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 329 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 344 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 225 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 295 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 336 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 236 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 348 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 178 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 115 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 212 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 205 bp overlap
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 127 bp overlap
ChIP breast_tumor_Male_20 GSE104399.AR.breast_tumor_Male_20 236 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 288 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 215 bp overlap
BCL11A 2 datasets
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 194 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 196 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 162 bp overlap
BHLHE40 1 dataset
ChIP IMR-90 ENCFF312JYK 91 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 120 bp overlap
BRD4 4 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 354 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 352 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 256 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 230 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 204 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 264 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 317 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 224 bp overlap
CTCF 1 dataset
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 222 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 242 bp overlap
ChIP BLaER1 ENCFF460KDD 354 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 272 bp overlap
ESR1 3 datasets
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 340 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 91 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 109 bp overlap
EZH1 2 datasets
ChIP ProEs GSE59087.EZH1.ProEs 158 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 248 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 309 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 178 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 141 bp overlap
FOS 4 datasets
ChIP IMR-90 ENCFF179EDA 98 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 109 bp overlap
ChIP MCF-7 ENCFF282FWZ 100 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 158 bp overlap
FOSL2 5 datasets
ChIP MCF-7 ENCFF188KBZ 198 bp overlap
ChIP MCF-7 ENCFF716UWP 75 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 210 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 120 bp overlap
ChIP SK-N-SH ENCFF127ZDW 85 bp overlap
FOXA1 17 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 354 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 354 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 191 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 239 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 279 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 304 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 108 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 173 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 86 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 354 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 50 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 192 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 104 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 354 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 168 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 266 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 171 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 227 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 238 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 354 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 118 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 136 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 120 bp overlap
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 204 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 354 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 354 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 213 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 171 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 202 bp overlap
HMGB2 1 dataset
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 155 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 69 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 249 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 348 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 327 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 256 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 96 bp overlap
JUND 6 datasets
ChIP HepG2 ENCFF869OPW 77 bp overlap
ChIP SK-N-SH ENCFF551NEQ 67 bp overlap
ChIP SK-N-SH ENCFF971JKN 82 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 55 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 164 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 125 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 184 bp overlap
MAFK 3 datasets
ChIP HepG2 ENCFF743ZOF 234 bp overlap
ChIP IMR-90 ENCFF336DHZ 271 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 145 bp overlap
MED1 4 datasets
ChIP RH4 GSE83726.MED1.RH4 350 bp overlap
ChIP SGBS GSE64233.MED1.SGBS 354 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 354 bp overlap
ChIP myoblast GSE60026.MED1.myoblast 354 bp overlap
MYC 2 datasets
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 211 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 63 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 90 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 354 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 354 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 313 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 301 bp overlap
ChIP hESC GSE18292.NANOG.hESC 142 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Triptolide-30min GSE118494.NCAPH2.IMR-90_Triptolide-30min 354 bp overlap
ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 335 bp overlap
NFE2 1 dataset
ChIP K562 ENCFF047YKA 157 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 55 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 168 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PGR 2 datasets
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 354 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 354 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 354 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF833NJP 317 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 285 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 339 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 354 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 138 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 239 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 347 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 210 bp overlap
PPARG 1 dataset
ChIP ASC GSE21366.PPARG.ASC 65 bp overlap
PRDM14 3 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 354 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 353 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 170 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 111 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 159 bp overlap
REST 2 datasets
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 97 bp overlap
ChIP hippocampus GSE144226.REST.hippocampus 236 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 183 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 103 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 88 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 55 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 217 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 354 bp overlap
SMARCB1 4 datasets
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 176 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 104 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 212 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 354 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 354 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 97 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 195 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 130 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 354 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 354 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 280 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 292 bp overlap
TCF12 2 datasets
ChIP SK-N-SH ENCFF147AHB 137 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 151 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF582MWI 354 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 290 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 224 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 224 bp overlap
TWIST1 1 dataset
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 67 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 126 bp overlap
YY1 5 datasets
ChIP H1 ENCFF524BTL 311 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 354 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 354 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 354 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 313 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 351 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 96 bp overlap
ZNF708 1 dataset
ChIP HEK293T GSE78099.ZNF708.HEK293T 55 bp overlap
ZNF786 1 dataset
ChIP HEK293T GSE78099.ZNF786.HEK293T 163 bp overlap