chr2 : 213,234,658 213,235,122
464 bp 108 TFs 0 linked genes
This 464 bp open chromatin element has no linked target genes and is bound by 108 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:213,229,658 – 213,240,122
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
AHR 2 datasets
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 375 bp overlap
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 141 bp overlap
ATF4 3 datasets
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 208 bp overlap
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 187 bp overlap
ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ATF4.Jurkat_ZBTB1-KO_cDNA 162 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 246 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1_UV GSE103125.BCL6.OCI-Ly1_UV 266 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 143 bp overlap
BRD4 7 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 222 bp overlap
ChIP DND41 GSE54379.BRD4.DND41 385 bp overlap
ChIP OCI-Ly1_JQ1 GSE53601.BRD4.OCI-Ly1_JQ1 296 bp overlap
ChIP SEM GSE83671.BRD4.SEM 195 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 269 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 258 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 250 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 222 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 442 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 268 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
EBF1 5 datasets
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
ChIP GM12878 ENCFF167CZS 255 bp overlap
ChIP GM12878 ENCFF813OXE 255 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 198 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 308 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 401 bp overlap
ELK3 1 dataset
Motif DE_12h DE_12h-ELK3_MA0759.3 9 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV4 1 dataset
Motif DE_12h DE_12h-ETV4_MA0764.4 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 219 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FLI1 4 datasets
ChIP A-673 GSE99959.FLI1.A-673 248 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 334 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 295 bp overlap
ChIP SEM GSE117864.FLI1.SEM 244 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 138 bp overlap
ChIP DE DE-FOXA2-2 219 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
IKZF1 5 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 251 bp overlap
ChIP GM12878 ENCFF616FJX 464 bp overlap
ChIP GM12878 ENCFF753XDO 345 bp overlap
ChIP GM12878 ENCFF824TGK 293 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 363 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 453 bp overlap
ChIP GM12878 ENCFF918AID 402 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 405 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 283 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 278 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
KMT2A 1 dataset
ChIP SEM GSE83671.KMT2A.SEM 371 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Lhx3 1 dataset
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
MED1 3 datasets
ChIP SGBS GSE64233.MED1.SGBS 214 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 245 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 187 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 326 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 464 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 191 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 260 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 88 bp overlap
NFYA 1 dataset
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 186 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 185 bp overlap
NR3C1 1 dataset
ChIP NALM-6 GSE67046.NR3C1.NALM-6 145 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 197 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 173 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 250 bp overlap
POLR2A 1 dataset
ChIP GM12878 ENCFF412KAE 464 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
PRDM15 2 datasets
ChIP GM12878 ENCFF445SXY 281 bp overlap
ChIP GM12878 ENCFF445SXY 144 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Pax7 1 dataset
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 134 bp overlap
RELA 1 dataset
ChIP SGBS GSE64233.RELA.SGBS 165 bp overlap
RELB 1 dataset
ChIP GM12878 ENCFF217ADF 464 bp overlap
REST 2 datasets
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 183 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 464 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 131 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 287 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 353 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 237 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 214 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 236 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 174 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 207 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 286 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX18 2 datasets
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 246 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 232 bp overlap
SOX4 2 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SOX8 2 datasets
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
SOX9 2 datasets
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 50 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox5 2 datasets
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF184 2 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ChIP WTC11 ENCFF352POG 402 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF35 1 dataset
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF592 1 dataset
ChIP GM12878 ENCFF818ABS 126 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap