chr2 : 152,456,311 – 152,456,545
234 bp 89 TFs 1 linked gene
This 234 bp open chromatin element is linked to ENSG00000287085 and is bound by 89 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000287085 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:152,451,311 – 152,461,545
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 95 bp overlap
AR 1 dataset
ChIP epididymis_HEE_R1881 GSE109061.AR.epididymis_HEE_R1881 199 bp overlap
ARID1A 4 datasets
ChIP 12Z GSE129781.ARID1A.12Z 142 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 234 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 232 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 234 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 234 bp overlap
BRD2 8 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 234 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 196 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 187 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 187 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 201 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 210 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 207 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 107 bp overlap
BRD4 12 datasets
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 211 bp overlap
ChIP HCC1806_300nMJQ1_24h GSE87418.BRD4.HCC1806_300nMJQ1_24h 206 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 117 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 117 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 234 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 222 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 222 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 234 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 234 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 234 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 211 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 234 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 234 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 234 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 234 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 199 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 207 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 234 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 234 bp overlap
EP300 3 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 122 bp overlap
ChIP HepG2 ENCFF076TMZ 234 bp overlap
ChIP HepG2 ENCFF354ACD 234 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 181 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV5 1 dataset
ChIP HepG2 ENCFF456LSA 234 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 234 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 234 bp overlap
ChIP MCF-7 ENCFF282FWZ 198 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 234 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 211 bp overlap
FOSL1 1 dataset
ChIP HepG2 ENCFF095FBN 222 bp overlap
FOSL2 5 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 224 bp overlap
ChIP HepG2 ENCFF548CXY 231 bp overlap
ChIP HepG2 ENCFF796NIA 214 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 209 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 234 bp overlap
FOXA1 9 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 211 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 234 bp overlap
ChIP HepG2 ENCFF207NVJ 131 bp overlap
ChIP HepG2 ENCFF740VZW 158 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 105 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 50 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 209 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 234 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 234 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 119 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 234 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 178 bp overlap
ChIP HepG2 ENCFF570ABM 129 bp overlap
GABPB1 1 dataset
ChIP HepG2 ENCFF315AWN 234 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 183 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 228 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 234 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 72 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUN 9 datasets
ChIP 786-O GSE86092.JUN.786-O 229 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 234 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 234 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 234 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 234 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 234 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 234 bp overlap
ChIP Hep-G2 ENCSR000EEK.JUN.Hep-G2 150 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 198 bp overlap
JUNB 3 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 222 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 149 bp overlap
ChIP keratinocyte_CTR GSE139685.JUNB.keratinocyte_CTR 188 bp overlap
JUND 5 datasets
ChIP H1 ENCFF010YXS 209 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 143 bp overlap
ChIP HepG2 ENCFF172HFZ 183 bp overlap
ChIP HepG2 ENCFF869OPW 217 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 181 bp overlap
MED1 1 dataset
ChIP U-87MG GSE36354.MED1.U-87MG 234 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 215 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 202 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 220 bp overlap
NELFE 1 dataset
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 119 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 123 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 203 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR2F6 1 dataset
ChIP HepG2 ENCFF514UJI 234 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 205 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 234 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
ONECUT1 2 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 211 bp overlap
ChIP HepG2 ENCFF243FIR 234 bp overlap
PAXIP1 1 dataset
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 156 bp overlap
PBX1 1 dataset
ChIP A-549 ENCSR637RKG.PBX1.A-549 191 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 205 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 160 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 234 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 93 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
ChIP HepG2 ENCFF582XUA 234 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 170 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 206 bp overlap
RUNX3 1 dataset
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 2 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 234 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 234 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 234 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 234 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 234 bp overlap
SMAD3 5 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 234 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 234 bp overlap
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 234 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 234 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 234 bp overlap
SMARCA4 7 datasets
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 55 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 63 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 234 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 215 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 234 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 214 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 201 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 200 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 200 bp overlap
SNAI1 2 datasets
ChIP HepG2 ENCFF017SIW 234 bp overlap
ChIP HepG2 ENCFF017SIW 234 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 206 bp overlap
SOX6 2 datasets
ChIP HepG2 ENCFF767OCK 234 bp overlap
ChIP HepG2 ENCFF767OCK 202 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 234 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 215 bp overlap
STAT1 1 dataset
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
STAT3 6 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 234 bp overlap
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 160 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 224 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 234 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 234 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TEAD1 4 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 208 bp overlap
ChIP HepG2 ENCFF661PNM 234 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 234 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 234 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 234 bp overlap
TEAD4 9 datasets
ChIP H1 ENCFF778PAX 207 bp overlap
ChIP Hep-G2 ENCSR000BRP.TEAD4.Hep-G2 215 bp overlap
ChIP HepG2 ENCFF006QNB 234 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 227 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 234 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 224 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 234 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 234 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 234 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 186 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 156 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 169 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 234 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 234 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZBED2 1 dataset
Motif DE_12h DE_12h-ZBED2_MA1971.2 7 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 115 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 152 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 234 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF532 1 dataset
ChIP NMC24335 GSE96775.ZNF532.NMC24335 234 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 234 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Huangfu Lab · Publications · Resources · Contact