chr22 : 39,457,158 – 39,457,453
295 bp 73 TFs 1 linked gene
This 295 bp open chromatin element is linked to MGAT3 and is bound by 73 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MGAT3 146 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:39,452,158 – 39,462,453
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 194 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 113 bp overlap
ARNTL 1 dataset
ChIP GSC_387 GSE134972.ARNTL.GSC_387 295 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 295 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 232 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 295 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 295 bp overlap
BRD2 1 dataset
ChIP NCI-H23 GSE113714.BRD2.NCI-H23 295 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 190 bp overlap
BRD4 8 datasets
ChIP 402-91 GSE111253.BRD4.402-91 161 bp overlap
ChIP BE2C GSE80151.BRD4.BE2C 194 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 295 bp overlap
ChIP Mutu-1_JQ1 GSE84213.BRD4.Mutu-1_JQ1 83 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 67 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 210 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 194 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 86 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 82 bp overlap
CBX7 1 dataset
ChIP hESC GSE133412.CBX7.hESC 56 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 217 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 81 bp overlap
CTCF 5 datasets
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 95 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 127 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 74 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 56 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 70 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 83 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 234 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000EWJ.E2F6.K-562 150 bp overlap
ERG 2 datasets
ChIP K-562 GSE23730.ERG.K-562 100 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 295 bp overlap
ETS1 4 datasets
ChIP cardiomyocyte_D5 GSE129986.ETS1.cardiomyocyte_D5 128 bp overlap
ChIP cardiomyocyte_D5 GSE129986.ETS1.cardiomyocyte_D5 119 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 94 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 162 bp overlap
EZH2 7 datasets
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 295 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 51 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 99 bp overlap
ChIP fibroblast of lung ENCFF479BAW 136 bp overlap
ChIP hESC GSE113817.EZH2.hESC 295 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 59 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 59 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 72 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 172 bp overlap
KDM4A 6 datasets
ChIP H1 ENCFF078LED 199 bp overlap
ChIP H1 ENCFF078LED 295 bp overlap
ChIP H1 ENCFF078LED 239 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 295 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 295 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 295 bp overlap
KDM4C 1 dataset
ChIP SW1783 GSE92483.KDM4C.SW1783 68 bp overlap
KLF1 1 dataset
ChIP HUDEP-2_S4 GSE97671.KLF1.HUDEP-2_S4 146 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 162 bp overlap
KMT2A 6 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 59 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 53 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 185 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 120 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 153 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 114 bp overlap
KMT2B 1 dataset
ChIP HEK293T_C-term_C104 GSE90762.KMT2B.HEK293T_C-term_C104 72 bp overlap
MAX 4 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 255 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 218 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 194 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 200 bp overlap
MYC 4 datasets
ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 62 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 169 bp overlap
ChIP P493-6_0HR GSE125863.MYC.P493-6_0HR 295 bp overlap
ChIP P493-6_4HR GSE125863.MYC.P493-6_4HR 94 bp overlap
MYC-DAXX 1 dataset
ChIP HEK293_GAL4-DBD GSE107348.MYC-DAXX.HEK293_GAL4-DBD 77 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 295 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 295 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 151 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 239 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 295 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 167 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 295 bp overlap
NR3C1 1 dataset
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 168 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 156 bp overlap
PCBP1 1 dataset
ChIP K-562 ENCSR052PTN.PCBP1.K-562 67 bp overlap
PHF8 2 datasets
ChIP K-562 ENCSR000AQH.PHF8.K-562 80 bp overlap
ChIP K562 ENCFF217UCA 285 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 204 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 277 bp overlap
POLR2G 3 datasets
ChIP K562 ENCFF047BLG 53 bp overlap
ChIP K562 ENCFF648YPL 218 bp overlap
ChIP K562 ENCFF648YPL 53 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 295 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 295 bp overlap
RAD21 5 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 130 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 63 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 185 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 93 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 174 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 150 bp overlap
ChIP K562 ENCFF070CVK 121 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 71 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 71 bp overlap
REST 1 dataset
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 203 bp overlap
RNF2 3 datasets
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 295 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 125 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 84 bp overlap
RUNX1 1 dataset
ChIP H9_DOX-5_HA GSE137670.RUNX1.H9_DOX-5_HA 87 bp overlap
SIN3A 2 datasets
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 295 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 158 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 295 bp overlap
SMARCA4 6 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 93 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 70 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 185 bp overlap
ChIP NCI-H1703 GSE121755.SMARCA4.NCI-H1703 50 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 138 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 80 bp overlap
SMARCC1 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 295 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 170 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 159 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 76 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 295 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 139 bp overlap
STAG1 1 dataset
ChIP erythroid GSE67783.STAG1.erythroid 207 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF881NFR 151 bp overlap
ChIP H1 ENCFF881NFR 295 bp overlap
ChIP H1 ENCFF881NFR 295 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 159 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 295 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 59 bp overlap
TRIM24 3 datasets
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 295 bp overlap
ChIP LNCaP_DHT GSE69331.TRIM24.LNCaP_DHT 281 bp overlap
ChIP LNCaP_ETOH GSE69331.TRIM24.LNCaP_ETOH 295 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 190 bp overlap
UBTF 3 datasets
ChIP K-562 ENCSR000EFW.UBTF.K-562 55 bp overlap
ChIP K-562 ENCSR000EFZ.UBTF.K-562 54 bp overlap
ChIP K562 ENCFF174SPM 223 bp overlap
VEZF1 1 dataset
ChIP K-562 ENCSR189YMA.VEZF1.K-562 221 bp overlap
YY1 3 datasets
ChIP GM12892 ENCSR000BLT.YY1.GM12892 51 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 87 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 64 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752POA 133 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 92 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCFF191NFH 86 bp overlap
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 141 bp overlap
ZFX 3 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 124 bp overlap
ChIP K562 ENCFF169LZT 215 bp overlap
ChIP K562 ENCFF536AJO 127 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 220 bp overlap
ChIP K-562 GSE121133.ZNF148.K-562 187 bp overlap
ZNF202 1 dataset
ChIP HEK293T GSE78099.ZNF202.HEK293T 71 bp overlap
ZNF281 1 dataset
ChIP K-562 GSE121133.ZNF281.K-562 118 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 295 bp overlap
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