chr19 : 43,623,946 – 43,624,138
192 bp 74 TFs 1 linked gene
This 192 bp open chromatin element is linked to ZNF428 and is bound by 74 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZNF428 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:43,618,946 – 43,629,138
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
74 transcription factors
Source
Cell type
AGO1 4 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 192 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 192 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 79 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 65 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 192 bp overlap
ChIP HepG2 ENCFF773YDL 192 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 104 bp overlap
ARID3A 1 dataset
ChIP K-562 ENCSR000EFY.ARID3A.K-562 105 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 192 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 192 bp overlap
BCL11A 2 datasets
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 134 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 159 bp overlap
BRD4 2 datasets
ChIP SW480 GSE110473.BRD4.SW480 161 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 124 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 192 bp overlap
CHD4 1 dataset
ChIP A-549 ENCSR550SCU.CHD4.A-549 176 bp overlap
CREB1 1 dataset
ChIP K562 ENCFF786DGQ 192 bp overlap
CTCF 1 dataset
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 121 bp overlap
CXXC4 1 dataset
ChIP HEK293T GSE42958.CXXC4.HEK293T 175 bp overlap
CXXC5 2 datasets
ChIP K562 ENCFF497CZN 192 bp overlap
ChIP K562 ENCFF497CZN 192 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 139 bp overlap
DIDO1 1 dataset
ChIP K-562 ENCSR167JBG.DIDO1.K-562 127 bp overlap
E2F1 1 dataset
ChIP K562 ENCFF163BSY 192 bp overlap
EGR1 7 datasets
ChIP Ishikawa ENCFF550FKT 181 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 192 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 192 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 143 bp overlap
ChIP K562 ENCFF006PJY 117 bp overlap
ChIP K562 ENCFF113OPQ 192 bp overlap
ChIP K562 ENCFF895KGN 110 bp overlap
ESR1 1 dataset
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 160 bp overlap
ETV5 1 dataset
ChIP K562 ENCFF336FFA 192 bp overlap
GATA1 1 dataset
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 134 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 137 bp overlap
GTF2F1 2 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 171 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 135 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 152 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 69 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 133 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 91 bp overlap
HMGN3 2 datasets
ChIP K562 ENCFF083BIJ 192 bp overlap
ChIP K562 ENCFF083BIJ 139 bp overlap
HNRNPL 2 datasets
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 107 bp overlap
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 74 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 140 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 187 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 113 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 98 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 192 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 192 bp overlap
KLF14 1 dataset
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 192 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 131 bp overlap
KLF5 1 dataset
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 192 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 95 bp overlap
ChIP HEK293 ENCFF588INF 192 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 192 bp overlap
KMT2B-D 1 dataset
ChIP SW480 GSE115985.KMT2B-D.SW480 192 bp overlap
MAX 1 dataset
ChIP K562 ENCFF110LJS 81 bp overlap
MAZ 3 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 192 bp overlap
ChIP K-562 ENCSR163IUV.MAZ.K-562 145 bp overlap
ChIP K562 ENCFF333ZIV 192 bp overlap
MEN1 1 dataset
ChIP MOLM-13 GSE149183.MEN1.MOLM-13 192 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 82 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 192 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 192 bp overlap
NFE2L2 1 dataset
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 162 bp overlap
NR2F2 1 dataset
ChIP K562 ENCFF004YPK 104 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF689EWI 192 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 171 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 192 bp overlap
ChIP K562 ENCFF215CWW 112 bp overlap
ChIP K562 ENCFF419GHN 192 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 192 bp overlap
ChIP K562 ENCFF648YPL 192 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 192 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 192 bp overlap
PREB 1 dataset
ChIP K562 ENCFF378WFY 192 bp overlap
RBFOX2 5 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 192 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 192 bp overlap
ChIP K562 ENCFF196WTG 192 bp overlap
ChIP K562 ENCFF967GRF 192 bp overlap
ChIP K562 ENCFF967GRF 192 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 192 bp overlap
RPA2_phospho 1 dataset
ChIP HeLa GSE108172.RPA2_phospho.HeLa 56 bp overlap
SP1 2 datasets
ChIP HEK293 GSE76494.SP1.HEK293 190 bp overlap
ChIP K562 ENCFF907BMO 192 bp overlap
SP2 3 datasets
ChIP HEK293 ENCFF181QXT 192 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 192 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 192 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 192 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 192 bp overlap
SP4 2 datasets
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
ChIP HEK293 GSE76494.SP4.HEK293 192 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 87 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 166 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 174 bp overlap
TAF15 4 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 97 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 50 bp overlap
ChIP HepG2 ENCFF116QSW 107 bp overlap
ChIP HepG2 ENCFF406BOT 112 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 158 bp overlap
TCF7L2 1 dataset
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 157 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 192 bp overlap
TP53 2 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 89 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 192 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 53 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 192 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 187 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 192 bp overlap
ZFX 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 133 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 92 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 63 bp overlap
ZNF7 1 dataset
ChIP K562 ENCFF096OHS 192 bp overlap
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