chr19 : 43,502,111 – 43,502,386
275 bp 80 TFs 1 linked gene
This 275 bp open chromatin element is linked to PHLDB3 and is bound by 80 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PHLDB3 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:43,497,111 – 43,507,386
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AR 5 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 175 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 164 bp overlap
ChIP VCaP GSE92347.AR.VCaP 137 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 175 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 275 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 261 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 237 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 231 bp overlap
BRD4 3 datasets
ChIP hESC GSE33281.BRD4.hESC 94 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 275 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 271 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 215 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 120 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 220 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 202 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 130 bp overlap
CTCF 1 dataset
ChIP GM23338 ENCFF531QOI 73 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 146 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 275 bp overlap
E2F5 2 datasets
ChIP WTC11 ENCFF449LLF 275 bp overlap
ChIP WTC11 ENCFF449LLF 224 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 84 bp overlap
ChIP H1 ENCFF785DWK 275 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 186 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 136 bp overlap
EP300 3 datasets
ChIP H1 ENCFF937OPV 205 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 211 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 275 bp overlap
ESR1 4 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 207 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 216 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 268 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 275 bp overlap
EZH2 1 dataset
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 251 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 275 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 208 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 275 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 215 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 85 bp overlap
GTF2F1 3 datasets
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 255 bp overlap
ChIP K-562 GSE120104.GTF2F1.K-562 155 bp overlap
ChIP WA01 ENCSR000EBP.GTF2F1.WA01 157 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 131 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 246 bp overlap
HNRNPLL 1 dataset
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 165 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 207 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 138 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 127 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 136 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 275 bp overlap
KLF1 3 datasets
ChIP HEK293 ENCFF159QSW 275 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 275 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 166 bp overlap
KLF14 1 dataset
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 240 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 197 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 163 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 113 bp overlap
ChIP HEK293 ENCFF588INF 114 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 275 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 185 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 256 bp overlap
ChIP WTC11 ENCFF223QFY 275 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 138 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 192 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 240 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 206 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 192 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 134 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 275 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 275 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 251 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 275 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 158 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 145 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 275 bp overlap
ChIP H1 ENCFF833NJP 275 bp overlap
ChIP spleen ENCFF446ZGT 200 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 275 bp overlap
ChIP K562 ENCFF648YPL 275 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 185 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 211 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 123 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 185 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 186 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 275 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 196 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 149 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 148 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 275 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 243 bp overlap
RBFOX2 8 datasets
ChIP HepG2 ENCFF939HTZ 89 bp overlap
ChIP HepG2 ENCFF939HTZ 275 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 275 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 275 bp overlap
ChIP K562 ENCFF196WTG 50 bp overlap
ChIP K562 ENCFF196WTG 275 bp overlap
ChIP K562 ENCFF967GRF 50 bp overlap
ChIP K562 ENCFF967GRF 275 bp overlap
RELA 3 datasets
ChIP HEK293_30_min GSE89017.RELA.HEK293_30_min 275 bp overlap
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 275 bp overlap
ChIP HEK293_TNF-30min GSE75562.RELA.HEK293_TNF-30min 251 bp overlap
RNF2 1 dataset
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 127 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 223 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 218 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 141 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 275 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 195 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 90 bp overlap
SP1 3 datasets
ChIP HEK293 GSE76494.SP1.HEK293 175 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 133 bp overlap
ChIP WTC11 ENCFF688PEU 275 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 196 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 275 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 215 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 118 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 212 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 275 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 253 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 220 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 275 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 275 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 241 bp overlap
ChIP WA01 GSE39096.YY1.WA01 171 bp overlap
ZBTB33 3 datasets
ChIP K562 ENCFF427SDV 275 bp overlap
ChIP K562 ENCFF875HLX 275 bp overlap
ChIP MCF-7 ENCSR231YFE.ZBTB33.MCF-7 256 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 171 bp overlap
ZNF143 3 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 174 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 155 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 103 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 209 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 235 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCFF436CGE 103 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 183 bp overlap
ZNF563 1 dataset
ChIP HEK293 GSE76494.ZNF563.HEK293 230 bp overlap
ZNF667 1 dataset
ChIP HEK293 GSE76494.ZNF667.HEK293 230 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 261 bp overlap
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