chr18 : 9,106,879 9,107,161
282 bp 93 TFs 3 linked genes
This 282 bp open chromatin element is linked to ENSG00000265257, NDUFV2, and ENSG00000288939 and is bound by 93 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000265257 4.1 kb Proximal Proximity
NDUFV2 4.2 kb Proximal Proximity
ENSG00000288939 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:9,101,879 – 9,112,161
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 282 bp overlap
BCL6B 2 datasets
ChIP HEK293 ENCFF555YRB 282 bp overlap
ChIP HEK293 ENCSR673SGK.BCL6B.HEK293 244 bp overlap
BRD2 1 dataset
ChIP MM1-S GSE43743.BRD2.MM1-S 109 bp overlap
BRD3 1 dataset
ChIP MM1-S GSE43743.BRD3.MM1-S 282 bp overlap
BRD4 2 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 135 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 67 bp overlap
CDK8 1 dataset
ChIP MM1-S GSE43743.CDK8.MM1-S 154 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 282 bp overlap
ChIP H1 ENCFF126NLU 87 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 282 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 255 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 282 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 282 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 263 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 273 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 201 bp overlap
ChIP K562 ENCFF574LOW 282 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 282 bp overlap
ETS1 3 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 167 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 175 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 218 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 282 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 282 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 282 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 209 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 156 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 247 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 282 bp overlap
ChIP DE DE-FOXA2-2 282 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 282 bp overlap
ChIP DE DE-GATA4-2 282 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 282 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 282 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 282 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 282 bp overlap
ChIP DE DE-GATA6-2 282 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 282 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 282 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 282 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 282 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 282 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 282 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 282 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 282 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 282 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 192 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 176 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 282 bp overlap
ChIP K562 ENCFF317JJX 282 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 180 bp overlap
HOXB13 1 dataset
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 76 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 134 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 282 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 245 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF128TYE 282 bp overlap
KLF16 2 datasets
ChIP HEK293 ENCFF558HSJ 282 bp overlap
ChIP HEK293 ENCSR397DQC.KLF16.HEK293 265 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 224 bp overlap
KLF3 1 dataset
ChIP HEK293 GSE69739.KLF3.HEK293 224 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE83671.KMT2A.MV4-11 93 bp overlap
MAFF 2 datasets
ChIP HeLa-S3 ENCFF783SBT 76 bp overlap
ChIP HepG2 ENCFF452YUT 102 bp overlap
MAFK 3 datasets
ChIP A549 ENCFF371EPR 120 bp overlap
ChIP HepG2 ENCFF743ZOF 78 bp overlap
ChIP HepG2 ENCFF767LDG 83 bp overlap
MAX 2 datasets
ChIP MM1-S_JQ1 GSE42161.MAX.MM1-S_JQ1 81 bp overlap
ChIP MM1-S_JQ1 GSE42161.MAX.MM1-S_JQ1 54 bp overlap
MED1 1 dataset
ChIP MM1-S_DMSO GSE36354.MED1.MM1-S_DMSO 197 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 282 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 282 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 282 bp overlap
ChIP K562 ENCFF320GSD 172 bp overlap
MEN1 1 dataset
ChIP RS4-11_DMSO-D3-180110 GSE127507.MEN1.RS4-11_DMSO-D3-180110 282 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 282 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 266 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 273 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 282 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 282 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 282 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 268 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 254 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 268 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 282 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 267 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 282 bp overlap
PBX2 3 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 282 bp overlap
ChIP K562 ENCFF286KMN 282 bp overlap
ChIP K562 ENCFF286KMN 83 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 147 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 262 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 181 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 282 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 273 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 274 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 233 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 282 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 234 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 258 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 282 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 159 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 282 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 262 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 282 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 213 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 282 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 279 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 282 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 282 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 196 bp overlap
SMARCA4 7 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 161 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 218 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 212 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 218 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 144 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 264 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 136 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 125 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 256 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 282 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 199 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 252 bp overlap
ChIP K562 ENCFF059YCJ 282 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 282 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 282 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 138 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 263 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 180 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF899VEC 270 bp overlap
TCF3 1 dataset
ChIP K562 ENCFF319QZT 282 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 282 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 270 bp overlap
ZBTB26 1 dataset
ChIP HEK293 GSE76494.ZBTB26.HEK293 56 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 143 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 277 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 282 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 282 bp overlap
ZNF266 1 dataset
ChIP HEK293 ENCFF483FIW 250 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 166 bp overlap
ZNF319 1 dataset
ChIP K562 ENCFF561ZSB 268 bp overlap
ZNF350 1 dataset
ChIP HEK293 ENCFF428BAO 282 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 262 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 263 bp overlap
ZNF623 1 dataset
ChIP HEK293 ENCFF505YHP 282 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 282 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 208 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 282 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 282 bp overlap
ZNF778 1 dataset
ChIP HEK293 GSE76494.ZNF778.HEK293 133 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 282 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 282 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 282 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 282 bp overlap