chr18 : 3,540,863 – 3,541,117
254 bp 63 TFs 0 linked genes
This 254 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:3,535,863 – 3,546,117
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AR 7 datasets
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 202 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 227 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 135 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 149 bp overlap
ChIP prostate_1239_T GSE130408.AR.prostate_1239_T 229 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 98 bp overlap
ChIP prostate_DHT GSE61838.AR.prostate_DHT 62 bp overlap
ASCL1 2 datasets
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 133 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 127 bp overlap
BRD4 3 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 192 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 182 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 198 bp overlap
CEBPB 2 datasets
ChIP Ishikawa ENCFF010USJ 246 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 254 bp overlap
CREBBP 1 dataset
ChIP PC-3 GSE147455.CREBBP.PC-3 127 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 152 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 196 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 254 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 254 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 163 bp overlap
ESR1 43 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 254 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 254 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 246 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 231 bp overlap
ChIP Ishikawa ENCSR000BIZ.ESR1.Ishikawa 212 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 254 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 254 bp overlap
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 129 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 254 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 254 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 254 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 254 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 254 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 254 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 254 bp overlap
ChIP Ishikawa_ETV4-KO1_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO1_Rescue 254 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 254 bp overlap
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 254 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 254 bp overlap
ChIP Ishikawa_EnhiE2 GSE99905.ESR1.Ishikawa_EnhiE2 254 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 254 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 254 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 254 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 254 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 254 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 67 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 152 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 141 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 115 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 168 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 192 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 136 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_1 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_1 189 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 226 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_4 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_4 172 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_5 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_5 147 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 190 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 196 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_G GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_G 186 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_J GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_J 199 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 254 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 254 bp overlap
ChIP primary-endometrium-cancer_E2_DSG GSE114737.ESR1.primary-endometrium-cancer_E2_DSG 254 bp overlap
EZH2 2 datasets
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 118 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 208 bp overlap
FOXA1 3 datasets
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 167 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 145 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 236 bp overlap
FOXM1 1 dataset
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 254 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 66 bp overlap
GATA6 5 datasets
ChIP AGS GSE51936.GATA6.AGS 140 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 64 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 254 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 254 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF968WBH 76 bp overlap
HDAC2 2 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 133 bp overlap
ChIP RH4_Entinostat-6H_bioMerck GSE116344.HDAC2.RH4_Entinostat-6H_bioMerck 153 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 179 bp overlap
ChIP K562 ENCFF055GAZ 227 bp overlap
ChIP K562 ENCFF317JJX 213 bp overlap
HOXB13 8 datasets
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 67 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 135 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 80 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 93 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 74 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 154 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 144 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 210 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 86 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 251 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 179 bp overlap
KMT2B-D 1 dataset
ChIP SW480 GSE115985.KMT2B-D.SW480 50 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 177 bp overlap
MAX 5 datasets
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 161 bp overlap
ChIP Ishikawa ENCFF064TDQ 167 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 254 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 209 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 204 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 168 bp overlap
MTA2 1 dataset
ChIP K562 ENCFF441KCP 57 bp overlap
MYCN 3 datasets
ChIP 22Rv1_intact GSE117304.MYCN.22Rv1_intact 81 bp overlap
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 254 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 250 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 117 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 208 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 56 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 147 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 254 bp overlap
NR3C1 4 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 239 bp overlap
ChIP Ishikawa ENCSR000BLB.NR3C1.Ishikawa 167 bp overlap
ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 214 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.NR3C1.Ishikawa_Dex_E2 250 bp overlap
PGR 4 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 254 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 254 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 205 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 213 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 222 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 85 bp overlap
RAD21 2 datasets
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 206 bp overlap
REST 1 dataset
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 182 bp overlap
RFX1 2 datasets
ChIP MCF-7 ENCFF782EZS 254 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 254 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 96 bp overlap
RXR 2 datasets
ChIP LS180_125 GSE31939.RXR.LS180_125 162 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 181 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 203 bp overlap
SMARCA4 3 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 254 bp overlap
ChIP K562 ENCFF506JCB 111 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 190 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 254 bp overlap
SMARCE1 1 dataset
ChIP K562 ENCFF690CFF 81 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 254 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 254 bp overlap
SPI1 1 dataset
ChIP DC_LPS GSE123347.SPI1.DC_LPS 105 bp overlap
SRF 2 datasets
ChIP Ishikawa ENCFF992QXM 254 bp overlap
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 209 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 254 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 254 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 254 bp overlap
TCF7L2 3 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 241 bp overlap
ChIP HeLa-S3 ENCFF673QAB 61 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 122 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 254 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 254 bp overlap
USF1 1 dataset
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 181 bp overlap
VDR 2 datasets
ChIP LS180_125 GSE31939.VDR.LS180_125 112 bp overlap
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 254 bp overlap
YY1 1 dataset
ChIP Ishikawa ENCFF505XQX 210 bp overlap
YY1AP1 3 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 238 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 193 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 135 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 64 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 147 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 165 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 96 bp overlap
ZNF770 1 dataset
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 50 bp overlap
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