chr17 : 21,377,758 21,378,334
576 bp 72 TFs 1 linked gene
This 576 bp open chromatin element is linked to KCNJ12 and is bound by 72 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KCNJ12 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:21,372,758 – 21,383,334
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP K-562 ENCSR641BSL.AGO1.K-562 193 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 199 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 329 bp overlap
BRD4 4 datasets
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 201 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 398 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 358 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 451 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 277 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 172 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 468 bp overlap
CTCF 87 datasets
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 202 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 160 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 214 bp overlap
ChIP GM10248 ENCFF083HVS 165 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 103 bp overlap
ChIP GM23338 ENCFF772DML 185 bp overlap
ChIP H1 ENCFF230QSV 154 bp overlap
ChIP H1 ENCFF414GZI 199 bp overlap
ChIP H1 ENCFF764RHO 232 bp overlap
ChIP H9 ENCFF152GTF 210 bp overlap
ChIP H9 ENCFF152GTF 110 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 153 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 251 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 239 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 209 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 188 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 268 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 156 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 172 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 390 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 205 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 212 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 277 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 173 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 162 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 166 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 111 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 239 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 196 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 193 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 122 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 180 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 110 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 152 bp overlap
ChIP brain ENCFF685VRG 317 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 269 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 257 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 326 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 240 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 222 bp overlap
ChIP coronary-artery ENCSR175FLL.CTCF.coronary-artery 178 bp overlap
ChIP endodermal cell ENCFF471YCZ 235 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 128 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 119 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 203 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 105 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 242 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 177 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 288 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 236 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 556 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 247 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 290 bp overlap
ChIP hepatocyte ENCFF263BLJ 254 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 240 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 206 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 194 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 177 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 191 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 181 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 222 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 212 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 267 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 225 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 258 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 274 bp overlap
ChIP leukemia_DMSO-24h GSE142161.CTCF.leukemia_DMSO-24h 207 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 324 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 490 bp overlap
ChIP neural cell ENCFF335ADI 192 bp overlap
ChIP neural crest cell ENCFF182LWK 298 bp overlap
ChIP neural progenitor cell ENCFF420RBO 220 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 367 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 270 bp overlap
ChIP osteocyte ENCFF929FPD 318 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 137 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 141 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 136 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 225 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 358 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 209 bp overlap
ChIP right atrium auricular region ENCFF696NTN 305 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 282 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 219 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 213 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 155 bp overlap
ChIP uterus ENCFF466ZUR 264 bp overlap
CTCFL 3 datasets
ChIP K-562 GSE70764.CTCFL.K-562 325 bp overlap
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 159 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 200 bp overlap
E2F5 1 dataset
ChIP WTC11 ENCFF449LLF 376 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 130 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 145 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 326 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 232 bp overlap
EZH2 14 datasets
ChIP GM23248 ENCFF404ZHM 245 bp overlap
ChIP H1 ENCFF232NZA 254 bp overlap
ChIP astrocyte ENCFF365JTP 313 bp overlap
ChIP astrocyte ENCFF365JTP 296 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 315 bp overlap
ChIP fibroblast of lung ENCFF479BAW 468 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 483 bp overlap
ChIP hepatocyte ENCFF552DZB 560 bp overlap
ChIP hepatocyte ENCFF552DZB 438 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 436 bp overlap
ChIP neural progenitor cell ENCFF018MKA 215 bp overlap
ChIP neural progenitor cell ENCFF018MKA 489 bp overlap
ChIP neural progenitor cell ENCFF472NFV 576 bp overlap
FOXA1 1 dataset
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 118 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 298 bp overlap
GABPA 2 datasets
ChIP H1 ENCFF739QFD 341 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 134 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 335 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 511 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 364 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 273 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 500 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 236 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE107730.INO80.Hep-G2 344 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 105 bp overlap
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 370 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 332 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 275 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 122 bp overlap
JUN 1 dataset
ChIP DE_D1 S13-DE-d1-JUN-exp1 264 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 327 bp overlap
ChIP H1 ENCFF078LED 327 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 247 bp overlap
MAX 3 datasets
ChIP P493-6 GSE36354.MAX.P493-6 424 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 210 bp overlap
ChIP WTC11 ENCFF223QFY 546 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 192 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 570 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
ChIP P493-6_24HR GSE125863.MYC.P493-6_24HR 140 bp overlap
MYCN 4 datasets
ChIP Kelly GSE94822.MYCN.Kelly 225 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 184 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 292 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 235 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 203 bp overlap
NFKB1 3 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 301 bp overlap
ChIP HEK293T GSE129618.NFKB1.HEK293T 114 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 423 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 362 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 339 bp overlap
NRF1 1 dataset
ChIP H1 ENCFF582PEJ 245 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 268 bp overlap
PHF8 1 dataset
ChIP H1 ENCFF427UFV 333 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 364 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 313 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 354 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 538 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 355 bp overlap
RAD21 13 datasets
ChIP H1 ENCFF698EWO 225 bp overlap
ChIP SK-N-SH ENCFF747MAS 194 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 207 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 216 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 149 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 155 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 186 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 165 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 233 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 218 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 258 bp overlap
ChIP neural cell ENCFF564MOT 398 bp overlap
ChIP neural cell ENCFF564MOT 195 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 555 bp overlap
RNF2 1 dataset
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 405 bp overlap
RORC 3 datasets
ChIP HCC70 GSE126380.RORC.HCC70 150 bp overlap
ChIP HCC70 GSE126380.RORC.HCC70 341 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 406 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 227 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 373 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 139 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 243 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 85 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 303 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 462 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 286 bp overlap
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 182 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 244 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 369 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 219 bp overlap
SP1 2 datasets
ChIP WTC11 ENCFF688PEU 354 bp overlap
ChIP WTC11 ENCFF688PEU 128 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 285 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 385 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 576 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 546 bp overlap
SUZ12 5 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 115 bp overlap
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 341 bp overlap
ChIP H1 ENCFF881NFR 572 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 193 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 286 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 415 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 318 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 249 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 351 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 313 bp overlap
ZNF2 1 dataset
ChIP HEK293T GSE78099.ZNF2.HEK293T 317 bp overlap
ZNF605 1 dataset
ChIP HEK293T GSE78099.ZNF605.HEK293T 228 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 56 bp overlap
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 326 bp overlap