chr17 : 17,079,384 17,079,899
515 bp 78 TFs 3 linked genes
This 515 bp open chromatin element is linked to MPRIP, FLCN, and COPS3 and is bound by 78 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
MPRIP 37.1 kb Distal Multiome
FLCN 157.6 kb Distal Multiome
COPS3 201.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:17,074,384 – 17,084,899
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
AR 20 datasets
ChIP DU145 GSE47987.AR.DU145 130 bp overlap
ChIP DU145 GSE47987.AR.DU145 102 bp overlap
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 156 bp overlap
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 66 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 124 bp overlap
ChIP LNCaP_1F5 GSE30623.AR.LNCaP_1F5 132 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 165 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 90 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 210 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 129 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 111 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 83 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 102 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 98 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 181 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 152 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 231 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 147 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 140 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 137 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 292 bp overlap
ASCL1 1 dataset
Motif DE_72h DE_72h-ASCL1_MA1100.3 8 bp overlap
Ascl2 1 dataset
Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap
BCL11A 8 datasets
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 62 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 120 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 122 bp overlap
ChIP CD34_Day9_15min GSE104676.BCL11A.CD34_Day9_15min 79 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 80 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 106 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 127 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 120 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 201 bp overlap
BRD4 3 datasets
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 225 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 331 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 82 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 57 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 77 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 133 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 133 bp overlap
CTCF 23 datasets
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 68 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 187 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 172 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 120 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 222 bp overlap
ChIP K562 ENCFF400DFR 241 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 153 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 110 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 156 bp overlap
ChIP Peyer's patch ENCFF746TCR 351 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 222 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 209 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 187 bp overlap
ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 233 bp overlap
ChIP heart right ventricle ENCFF979TCT 486 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 107 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 465 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 217 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 362 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 351 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 382 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 272 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 295 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 195 bp overlap
ESR1 5 datasets
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 123 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 360 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 285 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 197 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 156 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 173 bp overlap
FOXA1 2 datasets
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 154 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 225 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 376 bp overlap
ChIP DE DE-FOXA2-2 515 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 230 bp overlap
GATA1 2 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 57 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 147 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 211 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 395 bp overlap
ChIP DE DE-GATA4-2 482 bp overlap
ChIP foregut GSE117136.GATA4.foregut 307 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 340 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 400 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 404 bp overlap
ChIP DE DE-GATA6-2 515 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 242 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 469 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 287 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 447 bp overlap
ChIP foregut GSE117136.GATA6.foregut 268 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 353 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 343 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 174 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 361 bp overlap
HNF4A 2 datasets
ChIP liver ENCFF449HPV 107 bp overlap
ChIP liver ERP002306.HNF4A.liver 172 bp overlap
JRK 1 dataset
ChIP HepG2 ENCFF350YLO 287 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 267 bp overlap
MAX 2 datasets
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 75 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 196 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 201 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 155 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 56 bp overlap
MYC 1 dataset
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 91 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 209 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 274 bp overlap
MYF5 1 dataset
Motif DE_72h DE_72h-MYF5_MA1641.2 8 bp overlap
MYOD1 1 dataset
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
MYOG 1 dataset
Motif DE_72h DE_72h-MYOG_MA0500.3 8 bp overlap
NHLH1 1 dataset
Motif DE_72h DE_72h-NHLH1_MA0048.3 9 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 118 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 281 bp overlap
NR2F2 5 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 223 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 178 bp overlap
ChIP liver ENCFF565JGD 139 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 478 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 185 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 273 bp overlap
NR3C1 12 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 220 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 221 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 196 bp overlap
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 128 bp overlap
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 179 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 186 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 112 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 508 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 271 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 232 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 71 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 374 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 56 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 255 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 188 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 91 bp overlap
Olig2 1 dataset
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 276 bp overlap
PGR 7 datasets
ChIP AB32 GSE31129.PGR.AB32 162 bp overlap
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 148 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 189 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 162 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 178 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 125 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 132 bp overlap
POLR2A 5 datasets
ChIP esophagus muscularis mucosa ENCFF759BBR 206 bp overlap
ChIP sigmoid colon ENCFF754JQR 212 bp overlap
ChIP stomach ENCFF278MYS 112 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 158 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 163 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1619.2 8 bp overlap
RAD21 5 datasets
ChIP K-562 ENCSR000BKV.RAD21.K-562 113 bp overlap
ChIP K562 ENCFF634XYR 365 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 120 bp overlap
ChIP liver ENCFF522JHE 278 bp overlap
ChIP liver ENCFF522JHE 76 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 282 bp overlap
RUNX3 1 dataset
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 344 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 311 bp overlap
ChIP liver ENCFF807CIA 289 bp overlap
SIN3A 1 dataset
ChIP A-549 ENCSR513XQX.SIN3A.A-549 420 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 249 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 515 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 273 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 318 bp overlap
SMAD3 2 datasets
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 131 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 158 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 221 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 135 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 196 bp overlap
TFAP2B 1 dataset
Motif DE_72h DE_72h-TFAP2B_MA0811.2 11 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 428 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 152 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 152 bp overlap
Tcf12 1 dataset
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 142 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 139 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 126 bp overlap
ZNF449 2 datasets
Motif DE_72h DE_72h-ZNF449_MA1656.2 10 bp overlap
ChIP HEK293 GSE76494.ZNF449.HEK293 123 bp overlap
ZNF567 1 dataset
ChIP HepG2 ENCFF284TJW 480 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 440 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 488 bp overlap