chr16 : 5,928,760 – 5,928,990

230 bp 79 TFs 0 linked genes

This 230 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

79 transcription factors

ATF2 2 datasets

ChIP H1 ENCFF295GZO 230 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 173 bp overlap

BARX1 1 dataset

Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 177 bp overlap

BCL6 1 dataset

ChIP OCI-Ly1_UV GSE103125.BCL6.OCI-Ly1_UV 123 bp overlap

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 230 bp overlap

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 230 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 230 bp overlap

BRD4 1 dataset

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 131 bp overlap

BSX 1 dataset

Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 211 bp overlap

CHD2 1 dataset

ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 118 bp overlap

CHD7 2 datasets

ChIP H1 ENCFF126NLU 230 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 230 bp overlap

CREB1 2 datasets

ChIP GM23338 ENCFF432ZEW 230 bp overlap

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 230 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 213 bp overlap

DLX1 1 dataset

Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 80 bp overlap

EBF3_P177L 1 dataset

ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 205 bp overlap

EGR1 1 dataset

ChIP WA01 ENCSR000BJA.EGR1.WA01 123 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 230 bp overlap

FOXA1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 230 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 230 bp overlap

ChIP DE DE-FOXA2-2 230 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 230 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 206 bp overlap

GATA3 1 dataset

ChIP Kelly GSE94822.GATA3.Kelly 162 bp overlap

GBX2 1 dataset

Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 168 bp overlap

GRHL2 1 dataset

Motif ES_0h ES_0h-GRHL2_MA1105.3 8 bp overlap

HAND2 2 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 230 bp overlap

ChIP Kelly GSE94822.HAND2.Kelly 230 bp overlap

HDAC2 4 datasets

ChIP H1 ENCFF353UJQ 230 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 223 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 71 bp overlap

HESX1 1 dataset

Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 223 bp overlap

JUN 2 datasets

ChIP ESC S34-ESC-d0-JUN-exp2 230 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 230 bp overlap

LBX2 1 dataset

Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap

LEF1 1 dataset

ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 230 bp overlap

LHX2 1 dataset

Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 230 bp overlap

MSX1 1 dataset

Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap

MXI1 1 dataset

ChIP SK-N-SH ENCFF746HVJ 230 bp overlap

MYCN 1 dataset

ChIP Kelly GSE94822.MYCN.Kelly 230 bp overlap

Msx3 1 dataset

Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap

NANOG 6 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 230 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 230 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 192 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 230 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 230 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 230 bp overlap

NIPBL 5 datasets

ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 230 bp overlap

ChIP hESC GSE64758.NIPBL.hESC 213 bp overlap

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 230 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 230 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 219 bp overlap

Nobox 1 dataset

Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 220 bp overlap

PHOX2B 1 dataset

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 230 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 230 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1 8 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 230 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 230 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 230 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 230 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 124 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 230 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 230 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 227 bp overlap

PRDM14 1 dataset

ChIP NCCIT GSE71675.PRDM14.NCCIT 189 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAX 1 dataset

Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 157 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 178 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 230 bp overlap

SAP30 1 dataset

ChIP WA01 ENCSR000ATR.SAP30.WA01 226 bp overlap

SIN3A 2 datasets

ChIP H1 ENCFF042ZSL 230 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 177 bp overlap

SIX2 1 dataset

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 66 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 189 bp overlap

SMAD2_3 1 dataset

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 230 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 134 bp overlap

SMARCA4 3 datasets

ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 218 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 230 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 230 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 230 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 230 bp overlap

SMARCC1 3 datasets

ChIP ESC S25-ESC-d0-BAF155-exp1 186 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 230 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 230 bp overlap

SOX2 4 datasets

ChIP H9 GSE46837.SOX2.H9 182 bp overlap

ChIP HNSC GSE69479.SOX2.HNSC 230 bp overlap

ChIP hESC GSE69479.SOX2.hESC 180 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 208 bp overlap

SP1 2 datasets

ChIP H1 ENCFF263FUH 200 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 230 bp overlap

SP4 1 dataset

ChIP WA01 ENCSR000BQV.SP4.WA01 126 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 230 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 230 bp overlap

TCF12 2 datasets

ChIP H1 ENCFF203EBH 167 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 230 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 230 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 109 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 230 bp overlap

TP53 1 dataset

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 163 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 180 bp overlap

YY1 4 datasets

ChIP H1 ENCFF524BTL 90 bp overlap

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 191 bp overlap

ChIP NT2/D1 ENCFF999MII 178 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 230 bp overlap

ZNF19 1 dataset

ChIP HEK293T GSE78099.ZNF19.HEK293T 63 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 182 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 229 bp overlap