chr1 : 235,501,260 235,501,461
201 bp 76 TFs 1 linked gene
This 201 bp open chromatin element is linked to B3GALNT2 and is bound by 76 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
B3GALNT2 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:235,496,260 – 235,506,461
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 ERP001226.AR.MCF-7 76 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 91 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 195 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 201 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 201 bp overlap
BACH2 1 dataset
ChIP OCI-Ly7 GSE44420.BACH2.OCI-Ly7 201 bp overlap
CLOCK 1 dataset
ChIP MCF-7 ENCSR699YFX.CLOCK.MCF-7 201 bp overlap
CTBP1 3 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 124 bp overlap
ChIP K562 ENCFF403WPG 201 bp overlap
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 201 bp overlap
DPF2 3 datasets
ChIP K562 ENCFF775HUO 113 bp overlap
ChIP K562 ENCFF775HUO 201 bp overlap
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 135 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 201 bp overlap
ELF1 3 datasets
ChIP MCF-7 ENCFF305BNP 201 bp overlap
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 147 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 99 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 201 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 95 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 201 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 201 bp overlap
ESR1 15 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 201 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 76 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 95 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 201 bp overlap
ChIP MCF-7_E2-320min-ERalpha GSE94023.ESR1.MCF-7_E2-320min-ERalpha 161 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 121 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 137 bp overlap
ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 201 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 148 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 199 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 59 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 201 bp overlap
ChIP T-47D ENCSR000BKN.ESR1.T-47D 81 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 170 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 101 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 183 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 69 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 138 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 190 bp overlap
ChIP MCF-7 ENCFF282FWZ 155 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 201 bp overlap
FOSL2 2 datasets
ChIP MCF-7 ENCFF188KBZ 201 bp overlap
ChIP MCF-7 ENCSR546KCN.FOSL2.MCF-7 199 bp overlap
FOXA1 3 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 57 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 109 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 58 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 85 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 72 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 99 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 122 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 105 bp overlap
GATA3 11 datasets
ChIP MCF-7 ENCFF352QVM 161 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 132 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 71 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 92 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 104 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 54 bp overlap
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 53 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 69 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 145 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 102 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 155 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 123 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 90 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 201 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 201 bp overlap
GATA6 4 datasets
ChIP AGS GSE51705.GATA6.AGS 86 bp overlap
ChIP DE DE-GATA6-1 201 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 127 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 201 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 201 bp overlap
HDAC3 1 dataset
ChIP K562 ENCFF713GIR 55 bp overlap
HMBOX1 4 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 201 bp overlap
ChIP K562 ENCFF055GAZ 201 bp overlap
ChIP K562 ENCFF055GAZ 201 bp overlap
ChIP K562 ENCFF317JJX 201 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 201 bp overlap
ChIP GM12878 ENCFF824TGK 201 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 201 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 81 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 123 bp overlap
JUN 1 dataset
ChIP myometrium_PT916 GSE128230.JUN.myometrium_PT916 59 bp overlap
JUNB 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 161 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCFF971JKN 201 bp overlap
KLF13 1 dataset
ChIP HEK293 ENCSR946ZLI.KLF13.HEK293 201 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 201 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 201 bp overlap
MAF 2 datasets
ChIP keratinocyte_epidermal_PROLIF GSE52953.MAF.keratinocyte_epidermal_PROLIF 135 bp overlap
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 179 bp overlap
MAFB 2 datasets
ChIP islet ERP004003.MAFB.islet 201 bp overlap
ChIP keratinocyte_epidermal_PROLIF GSE52953.MAFB.keratinocyte_epidermal_PROLIF 147 bp overlap
MAFF 1 dataset
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 192 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 201 bp overlap
ChIP K562 ENCFF455EEO 201 bp overlap
MAFK 4 datasets
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF767LDG 201 bp overlap
ChIP IMR-90 ENCFF336DHZ 87 bp overlap
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 170 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 57 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 201 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCFF615CWQ 201 bp overlap
OVOL1 2 datasets
ChIP MCF-7 ENCFF537GWI 201 bp overlap
ChIP MCF-7 ENCSR829WBA.OVOL1.MCF-7 126 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 88 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 135 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF305NWS 201 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 201 bp overlap
REST 1 dataset
ChIP HEK293 ENCSR896UBV.REST.HEK293 201 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 186 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 170 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 201 bp overlap
SIN3A 2 datasets
ChIP MCF-7 ENCFF521RDC 201 bp overlap
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 123 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 201 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 147 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 67 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 106 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 201 bp overlap
ChIP MCF-7 GSE140185.SMARCA4.MCF-7 201 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 201 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 177 bp overlap
ChIP K562 ENCFF690CFF 201 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 106 bp overlap
SPI1 23 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 116 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 159 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 160 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 127 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 139 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 97 bp overlap
ChIP GM12878 ENCFF134LCP 101 bp overlap
ChIP GM12891 ENCFF563IUT 91 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 146 bp overlap
ChIP HL-60 ENCFF645GBT 166 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 174 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 120 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 149 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 120 bp overlap
ChIP K562 ENCFF410ORC 90 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 122 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 68 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 98 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 180 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 61 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 118 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 89 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 137 bp overlap
STAT3 2 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 170 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 170 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 70 bp overlap
TEAD4 1 dataset
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 201 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 201 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 201 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 121 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 201 bp overlap
ZEB2 5 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 201 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 178 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 201 bp overlap
ChIP K562 ENCFF795CMH 102 bp overlap
ChIP K562 ENCFF975RXS 201 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 201 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 185 bp overlap
ZNF184 2 datasets
ChIP HEK293 ENCFF221CII 201 bp overlap
ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 201 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 156 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 201 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 181 bp overlap
ChIP K562 ENCFF281INV 123 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 201 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 201 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 77 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 201 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 201 bp overlap