chr14 : 50,401,638 – 50,402,010
372 bp 87 TFs 2 linked genes
This 372 bp open chromatin element is linked to ENSG00000258857 and CDKL1 and is bound by 87 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000258857 4.6 kb Proximal Proximity
CDKL1 4.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:50,396,638 – 50,407,010
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 141 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 235 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 248 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 200 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 144 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 291 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 172 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 372 bp overlap
BHLHE22 1 dataset
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 3 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 372 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 350 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 211 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 234 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 126 bp overlap
ELK1::HOXB13 1 dataset
Motif ES_0h ES_0h-ELK1HOXB13_MA1932.2 15 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 329 bp overlap
ERF::HOXB13 1 dataset
Motif ES_0h ES_0h-ERFHOXB13_MA1937.2 13 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 248 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 132 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 226 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 73 bp overlap
FERD3L 1 dataset
Motif ES_0h ES_0h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 305 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 300 bp overlap
GFI1 1 dataset
Motif ES_0h ES_0h-GFI1_MA0038.3 11 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 216 bp overlap
Gfi1B 1 dataset
Motif ES_0h ES_0h-Gfi1B_MA0483.2 10 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 150 bp overlap
HOXD12::ELK1 1 dataset
Motif ES_0h ES_0h-HOXD12ELK1_MA1958.2 13 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 322 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 237 bp overlap
MAFK 7 datasets
ChIP A549 ENCFF371EPR 302 bp overlap
ChIP H1 ENCFF854XWE 97 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 135 bp overlap
ChIP HepG2 ENCFF743ZOF 227 bp overlap
ChIP HepG2 ENCFF767LDG 225 bp overlap
ChIP MCF-7 ENCFF558JLG 220 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 236 bp overlap
MAX 2 datasets
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 272 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 372 bp overlap
MEIS1 2 datasets
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MXI1 1 dataset
ChIP H1 ENCFF963FZS 337 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 187 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 330 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 201 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 212 bp overlap
ChIP hESC GSE20650.NANOG.hESC 151 bp overlap
ChIP hESC GSE18292.NANOG.hESC 164 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 282 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 187 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 226 bp overlap
NFYA 1 dataset
Motif ES_0h ES_0h-NFYA_MA0060.4 8 bp overlap
NFYB 1 dataset
Motif ES_0h ES_0h-NFYB_MA0502.3 9 bp overlap
NFYC 1 dataset
Motif ES_0h ES_0h-NFYC_MA1644.2 7 bp overlap
Neurod2 1 dataset
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 221 bp overlap
Olig2 1 dataset
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PKNOX2 1 dataset
Motif ES_0h ES_0h-PKNOX2_MA0783.1 12 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF566JSR 201 bp overlap
ChIP H1 ENCFF770YBQ 243 bp overlap
ChIP H1 ENCFF833NJP 233 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 172 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 304 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 209 bp overlap
Ptf1A 2 datasets
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1620.2 8 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 195 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 372 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 295 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 227 bp overlap
ChIP H1 ENCFF896IJG 301 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 247 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 251 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 242 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 113 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 279 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 262 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 283 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 161 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 238 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 270 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 286 bp overlap
ChIP hESC GSE122298.TBP.hESC 189 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 280 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 120 bp overlap
TBX1 1 dataset
Motif ES_0h ES_0h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif ES_0h ES_0h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap
TBX3 1 dataset
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif ES_0h ES_0h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 208 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 324 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 296 bp overlap
TEAD4 4 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 300 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP Ishikawa ENCFF772OTG 301 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 165 bp overlap
TFAP4 1 dataset
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
TGIF1 1 dataset
Motif ES_0h ES_0h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif ES_0h ES_0h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif ES_0h ES_0h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif ES_0h ES_0h-TGIF2LY_MA1572.1 12 bp overlap
THAP1 1 dataset
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 138 bp overlap
Tcf12 1 dataset
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 245 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 289 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 256 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 205 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 154 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 316 bp overlap
ZNF317 4 datasets
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ChIP HEK293 GSE76494.ZNF317.HEK293 185 bp overlap
ChIP HEK293T GSE78099.ZNF317.HEK293T 119 bp overlap
ChIP WTC11 ENCFF537KXI 337 bp overlap
ZNF680 1 dataset
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
Zic1::Zic2 2 datasets
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 2 datasets
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Zic3 2 datasets
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap
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