chr13 : 102,793,671 – 102,794,261
590 bp 91 TFs 3 linked genes
This 590 bp open chromatin element is linked to POGLUT2, BIVM-ERCC5, and BIVM and is bound by 91 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
POGLUT2 4.7 kb Proximal Proximity
BIVM-ERCC5 4.8 kb Proximal Proximity
BIVM 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:102,788,671 – 102,799,261
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 360 bp overlap
BARX2 1 dataset
Motif ES_0h ES_0h-BARX2_MA1471.2 9 bp overlap
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 87 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 165 bp overlap
Crx 2 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
Dmrt1 1 dataset
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 293 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
FEZF2 4 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-2 312 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
Motif ES_0h ES_0h-FOXA2_MA0047.4 8 bp overlap
ChIP HepG2 ENCFF570ABM 147 bp overlap
FOXA3 2 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
Motif ES_0h ES_0h-FOXA3_MA1683.2 7 bp overlap
FOXB1 2 datasets
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXC1 2 datasets
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
Motif ES_0h ES_0h-FOXC1_MA0032.2 11 bp overlap
FOXC2 2 datasets
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
Motif ES_0h ES_0h-FOXC2_MA0846.2 11 bp overlap
FOXD2 2 datasets
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
Motif ES_0h ES_0h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXI1 2 datasets
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
Motif ES_0h ES_0h-FOXI1_MA0042.2 7 bp overlap
FOXP1 2 datasets
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
Motif ES_0h ES_0h-FOXP1_MA0481.4 7 bp overlap
FOXP4 2 datasets
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
Motif ES_0h ES_0h-FOXP4_MA2117.1 7 bp overlap
FOXS1 2 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxl2 2 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
GSC 2 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 84 bp overlap
Gfi1B 2 datasets
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
Motif ES_0h ES_0h-Gfi1B_MA0483.2 10 bp overlap
HLF 2 datasets
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap
HNF1A 1 dataset
Motif ES_0h ES_0h-HNF1A_MA0046.3 13 bp overlap
HNF1B 1 dataset
Motif ES_0h ES_0h-HNF1B_MA0153.2 13 bp overlap
HNF4A 1 dataset
Motif ES_0h ES_0h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif ES_0h ES_0h-HNF4G_MA0484.3 9 bp overlap
HOXB13 1 dataset
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
Hic1 1 dataset
Motif ES_0h ES_0h-Hic1_MA0739.2 8 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
KLF17 1 dataset
Motif ES_0h ES_0h-KLF17_MA1514.2 14 bp overlap
MAFK 2 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MEF2A 1 dataset
Motif ES_0h ES_0h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif ES_0h ES_0h-MEF2B_MA0660.1 12 bp overlap
MEF2D 1 dataset
Motif ES_0h ES_0h-MEF2D_MA0773.1 12 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 307 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 238 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 590 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 437 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 231 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 533 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 345 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 239 bp overlap
ChIP hESC GSE20650.NANOG.hESC 165 bp overlap
ChIP hESC GSE18292.NANOG.hESC 138 bp overlap
NFIA 1 dataset
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIL3 2 datasets
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
NFIX 1 dataset
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
OTX1 2 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 2 datasets
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap
PITX1 2 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 2 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU4F2 1 dataset
Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap
POU5F1 13 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 296 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 486 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 503 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 590 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 235 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 168 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 495 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 458 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 298 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 235 bp overlap
POU5F1B 2 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm14 1 dataset
Motif ES_0h ES_0h-Prdm14_MA1998.2 8 bp overlap
Prdm4 2 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
REL 2 datasets
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
Motif ES_0h ES_0h-REL_MA0101.1 10 bp overlap
RFX1 2 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
RFX2 2 datasets
Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap
Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap
RFX3 2 datasets
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
RFX5 2 datasets
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap
RHOXF1 2 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 195 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 461 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 235 bp overlap
SMARCA4 2 datasets
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 191 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 171 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 482 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 153 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 324 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 275 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 255 bp overlap
ZNF135 4 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF175 2 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF213 4 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF384 1 dataset
Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap
ZNF460 2 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
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