chr13 : 91,360,228 91,361,348
1,120 bp 90 TFs 2 linked genes
This 1.1 kb open chromatin element is linked to MIR17HG and MIR92A1 and is bound by 90 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MIR17HG 8.8 kb Proximal Proximity
MIR92A1 8.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:91,355,228 – 91,366,348
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 321 bp overlap
AGO2 5 datasets
ChIP HepG2 ENCFF252VFI 198 bp overlap
ChIP HepG2 ENCFF252VFI 665 bp overlap
ChIP HepG2 ENCFF773YDL 225 bp overlap
ChIP HepG2 ENCFF773YDL 665 bp overlap
ChIP HepG2 ENCFF773YDL 665 bp overlap
ASXL1 2 datasets
ChIP HEK293T GSE51673.ASXL1.HEK293T 92 bp overlap
ChIP HEK293T GSE51673.ASXL1.HEK293T 137 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 168 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 148 bp overlap
Ar 1 dataset
Motif ES_0h ES_0h-Ar_MA0007.4 16 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 167 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 251 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 215 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 464 bp overlap
CCNT2 1 dataset
ChIP K-562 ENCSR000DOA.CCNT2.K-562 368 bp overlap
CEBPB 1 dataset
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 216 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 197 bp overlap
CHD2 2 datasets
ChIP K-562 ENCSR000EHD.CHD2.K-562 145 bp overlap
ChIP K-562 ENCSR000EHD.CHD2.K-562 208 bp overlap
CHD4 1 dataset
ChIP HepG2 ENCFF615GUT 55 bp overlap
CHD7 1 dataset
ChIP K-562 ENCSR000AVD.CHD7.K-562 185 bp overlap
CLOCK 1 dataset
ChIP MCF-7 ENCSR699YFX.CLOCK.MCF-7 303 bp overlap
DDX20 1 dataset
ChIP K-562 ENCSR446LAV.DDX20.K-562 566 bp overlap
DMRT3 1 dataset
Motif ES_0h ES_0h-DMRT3_MA0610.2 7 bp overlap
ELF4 4 datasets
ChIP HEK293T ENCFF509MGU 365 bp overlap
ChIP HEK293T ENCFF509MGU 365 bp overlap
ChIP HEK293T ENCFF509MGU 167 bp overlap
ChIP HEK293T ENCSR778QLY.ELF4.HEK293T 348 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 170 bp overlap
EWSR1 1 dataset
ChIP K-562 ENCSR142YYA.EWSR1.K-562 449 bp overlap
FIP1L1 1 dataset
ChIP K-562 GSE120104.FIP1L1.K-562 228 bp overlap
FOXA1 2 datasets
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 152 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 394 bp overlap
FUS 2 datasets
ChIP K-562 GSE120104.FUS.K-562 330 bp overlap
ChIP K-562 GSE120104.FUS.K-562 140 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 245 bp overlap
HNRNPK 1 dataset
ChIP K-562 GSE120104.HNRNPK.K-562 142 bp overlap
HNRNPL 2 datasets
ChIP K-562 GSE120104.HNRNPL.K-562 373 bp overlap
ChIP K-562 GSE120104.HNRNPL.K-562 95 bp overlap
HNRNPUL1 2 datasets
ChIP K-562 GSE120104.HNRNPUL1.K-562 871 bp overlap
ChIP K-562 ENCSR296MXW.HNRNPUL1.K-562 522 bp overlap
ILF3 2 datasets
ChIP K-562 ENCSR632TJQ.ILF3.K-562 483 bp overlap
ChIP K-562 ENCSR632TJQ.ILF3.K-562 256 bp overlap
JAZF1 1 dataset
ChIP WTC11 ENCFF958GRP 277 bp overlap
JUND 2 datasets
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 265 bp overlap
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 243 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 128 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_DMSO-D3-180110 GSE127507.KMT2A.MOLM-13_DMSO-D3-180110 835 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 182 bp overlap
MEF2B 1 dataset
ChIP DLBCL GSE110682.MEF2B.DLBCL 167 bp overlap
MLLT1_FKB 3 datasets
ChIP MV4-11 GSE82116.MLLT1_FKB.MV4-11 50 bp overlap
ChIP MV4-11 GSE82116.MLLT1_FKB.MV4-11 261 bp overlap
ChIP MV4-11 GSE82116.MLLT1_FKB.MV4-11 373 bp overlap
MPHOSPH8 3 datasets
ChIP H9 GSE95374.MPHOSPH8.H9 363 bp overlap
ChIP H9 GSE95374.MPHOSPH8.H9 355 bp overlap
ChIP H9 GSE95374.MPHOSPH8.H9 109 bp overlap
MTA3 2 datasets
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 210 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 239 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 570 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 214 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 310 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 60 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 812 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 155 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCFF023CAZ 577 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 271 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 358 bp overlap
NONO 1 dataset
ChIP K-562 GSE120104.NONO.K-562 314 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 402 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 269 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 211 bp overlap
Motif ES_0h ES_0h-NR3C1_MA0113.4 15 bp overlap
NR3C2 1 dataset
Motif ES_0h ES_0h-NR3C2_MA0727.2 15 bp overlap
PAF1 1 dataset
ChIP HepG2 ENCFF949UAN 377 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 246 bp overlap
PBX1-2-3 2 datasets
ChIP 697 GSE138031.PBX1-2-3.697 168 bp overlap
ChIP 697 GSE138031.PBX1-2-3.697 535 bp overlap
PCBP2 1 dataset
ChIP K-562 GSE120104.PCBP2.K-562 237 bp overlap
PML 2 datasets
ChIP GM12878 ENCSR000BQM.PML.GM12878 486 bp overlap
ChIP GM12878 ENCSR000BQM.PML.GM12878 531 bp overlap
POLR2A 10 datasets
ChIP GM12878 ENCFF263VRI 431 bp overlap
ChIP GM12892 ENCFF245LYF 545 bp overlap
ChIP GM19193 ENCFF599VTO 438 bp overlap
ChIP H1 ENCFF566JSR 264 bp overlap
ChIP H1 ENCFF566JSR 312 bp overlap
ChIP HeLa-S3 ENCFF455YYQ 504 bp overlap
ChIP HepG2 ENCFF736SLT 419 bp overlap
ChIP NB4 ENCFF780KAX 445 bp overlap
ChIP SK-N-MC ENCFF088IVG 166 bp overlap
ChIP SK-N-SH ENCFF683PFH 380 bp overlap
POLR2G 1 dataset
ChIP HepG2 ENCFF241AEG 647 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 115 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 170 bp overlap
Pgr 1 dataset
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
RAD21 5 datasets
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 289 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 227 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 225 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 342 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 75 bp overlap
RBM22 3 datasets
ChIP HepG2 ENCFF292RVQ 117 bp overlap
ChIP HepG2 ENCFF561IAJ 339 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 104 bp overlap
RBM39 3 datasets
ChIP K-562 GSE120104.RBM39.K-562 848 bp overlap
ChIP K-562 ENCSR764OXF.RBM39.K-562 155 bp overlap
ChIP K-562 ENCSR764OXF.RBM39.K-562 185 bp overlap
SIRT6 1 dataset
ChIP K-562 ENCSR000AUB.SIRT6.K-562 865 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 121 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 357 bp overlap
SRSF1 1 dataset
ChIP K-562 GSE120104.SRSF1.K-562 62 bp overlap
SRSF4 5 datasets
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 188 bp overlap
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 91 bp overlap
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 374 bp overlap
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 350 bp overlap
ChIP K-562 GSE120104.SRSF4.K-562 115 bp overlap
SSRP1 2 datasets
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 461 bp overlap
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 230 bp overlap
STAT5A 3 datasets
ChIP GM12878 ENCSR000BQZ.STAT5A.GM12878 560 bp overlap
ChIP GM12878 ENCSR000BQZ.STAT5A.GM12878 146 bp overlap
ChIP K-562 ENCSR000BRR.STAT5A.K-562 670 bp overlap
STAT6 1 dataset
ChIP K562 ENCFF444HZW 417 bp overlap
SUPT5H 10 datasets
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 182 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 291 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 449 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 261 bp overlap
ChIP HCT-116_DMSO_pSer666 GSE138548.SUPT5H.HCT-116_DMSO_pSer666 268 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 207 bp overlap
ChIP HCT-116_DMSO_pThr806 GSE138548.SUPT5H.HCT-116_DMSO_pThr806 297 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 581 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 132 bp overlap
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 409 bp overlap
Six3 1 dataset
Motif ES_0h ES_0h-Six3_MA0631.2 11 bp overlap
TRIM28 2 datasets
ChIP K-562 ENCSR000BRW.TRIM28.K-562 225 bp overlap
ChIP K-562 ENCSR000BRW.TRIM28.K-562 496 bp overlap
U2AF1 3 datasets
ChIP K-562 GSE120104.U2AF1.K-562 335 bp overlap
ChIP K-562 GSE120104.U2AF1.K-562 311 bp overlap
ChIP K-562 GSE120104.U2AF1.K-562 134 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 154 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 160 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 226 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 87 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF354B 1 dataset
ChIP HepG2 ENCFF455UYM 411 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 407 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 224 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 275 bp overlap