chr1 : 219,965,260 – 219,965,898
638 bp 94 TFs 0 linked genes
This 638 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:219,960,260 – 219,970,898
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 306 bp overlap
ChIP K562 ENCFF938UXQ 264 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 270 bp overlap
ATF3 1 dataset
ChIP K562 ENCFF921JQW 261 bp overlap
ATF6 1 dataset
Motif DE_48h DE_48h-ATF6_MA1466.2 13 bp overlap
BACH2 4 datasets
Motif DE_36h DE_36h-BACH2_MA1470.2 19 bp overlap
Motif DE_48h DE_48h-BACH2_MA1470.2 19 bp overlap
Motif DE_60h DE_60h-BACH2_MA1470.2 19 bp overlap
Motif DE_72h DE_72h-BACH2_MA1470.2 19 bp overlap
BCL11A 2 datasets
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 116 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 141 bp overlap
BRD2 1 dataset
ChIP K-562 GSE140325.BRD2.K-562 107 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 332 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 309 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 218 bp overlap
ChIP K562 ENCFF673OEZ 235 bp overlap
CEBPA 2 datasets
ChIP SGBS GSE41629.CEBPA.SGBS 260 bp overlap
ChIP liver ERP002306.CEBPA.liver 188 bp overlap
CEBPB 4 datasets
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 307 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 181 bp overlap
ChIP K562 ENCFF189VBN 271 bp overlap
ChIP K562 ENCFF194QGF 321 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 248 bp overlap
CREB3L1 1 dataset
Motif DE_48h DE_48h-CREB3L1_MA0839.2 13 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 232 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 223 bp overlap
DPF2 4 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 240 bp overlap
ChIP K562 ENCFF739JDE 391 bp overlap
ChIP K562 ENCFF775HUO 296 bp overlap
ChIP K562 ENCFF775HUO 577 bp overlap
DPRX 4 datasets
Motif DE_36h DE_36h-DPRX_MA1480.2 9 bp overlap
Motif DE_48h DE_48h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
DUX4 4 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Dmrt1 2 datasets
Motif DE_48h DE_48h-Dmrt1_MA1603.2 9 bp overlap
Motif DE_60h DE_60h-Dmrt1_MA1603.2 9 bp overlap
Dux 4 datasets
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 310 bp overlap
ESR2 4 datasets
Motif DE_36h DE_36h-ESR2_MA0258.2 15 bp overlap
Motif DE_48h DE_48h-ESR2_MA0258.2 15 bp overlap
Motif DE_60h DE_60h-ESR2_MA0258.2 15 bp overlap
Motif DE_72h DE_72h-ESR2_MA0258.2 15 bp overlap
ESRRA 4 datasets
Motif DE_36h DE_36h-ESRRA_MA0592.4 9 bp overlap
Motif DE_48h DE_48h-ESRRA_MA0592.4 9 bp overlap
Motif DE_60h DE_60h-ESRRA_MA0592.4 9 bp overlap
Motif DE_72h DE_72h-ESRRA_MA0592.4 9 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 366 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 371 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 586 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 219 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 175 bp overlap
ChIP DE DE-FOXA2-1 360 bp overlap
ChIP DE DE-FOXA2-2 278 bp overlap
GATA1 7 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 283 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 147 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 229 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 238 bp overlap
ChIP K562 ENCFF094CMK 251 bp overlap
GATA1::TAL1 2 datasets
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 7 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 187 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 350 bp overlap
ChIP K562 ENCFF513FTZ 270 bp overlap
GATA4 13 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 258 bp overlap
ChIP DE DE-GATA4-1 423 bp overlap
ChIP DE DE-GATA4-2 508 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 371 bp overlap
ChIP foregut GSE117136.GATA4.foregut 467 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 486 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 368 bp overlap
GATA5 4 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 21 datasets
ChIP AGS GSE51705.GATA6.AGS 288 bp overlap
ChIP AGS GSE51936.GATA6.AGS 98 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 170 bp overlap
ChIP DE DE-GATA6-1 356 bp overlap
ChIP DE DE-GATA6-2 470 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 360 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 383 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 284 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 411 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 390 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 391 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 439 bp overlap
ChIP foregut GSE117136.GATA6.foregut 387 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 359 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 401 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 391 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 413 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 191 bp overlap
Gata3 4 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 224 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 241 bp overlap
ChIP K562 ENCFF744ALD 359 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 260 bp overlap
HMBOX1 5 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 256 bp overlap
ChIP K562 ENCFF055GAZ 473 bp overlap
ChIP K562 ENCFF055GAZ 497 bp overlap
ChIP K562 ENCFF055GAZ 298 bp overlap
ChIP K562 ENCFF317JJX 460 bp overlap
HNF4A 3 datasets
Motif DE_48h DE_48h-HNF4A_MA0114.5 9 bp overlap
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
ChIP liver ENCFF354NRH 405 bp overlap
HNF4G 2 datasets
Motif DE_48h DE_48h-HNF4G_MA0484.3 9 bp overlap
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 251 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 104 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 429 bp overlap
MED1 2 datasets
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 344 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 212 bp overlap
MEIS1 7 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 252 bp overlap
ChIP K562 ENCFF320GSD 335 bp overlap
MITF 1 dataset
ChIP K562 ENCFF731XJJ 425 bp overlap
Mecom 4 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NBN 2 datasets
ChIP K-562 ENCSR085QEV.NBN.K-562 249 bp overlap
ChIP K562 ENCFF146YTY 379 bp overlap
NCOR1 2 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 217 bp overlap
ChIP K562 ENCFF788MPU 278 bp overlap
NFATC3 2 datasets
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NFYA 1 dataset
ChIP K-562 GSE26439.NFYA.K-562 195 bp overlap
NKX2-2 2 datasets
Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_72h DE_72h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 4 datasets
Motif DE_60h DE_60h-NKX2-5_MA0063.3 7 bp overlap
Motif DE_72h DE_72h-NKX2-5_MA0063.3 7 bp overlap
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 449 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 237 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 189 bp overlap
Nfat5 2 datasets
Motif DE_48h DE_48h-Nfat5_MA0606.3 8 bp overlap
Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
Nr5A2 4 datasets
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_48h DE_48h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_60h DE_60h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 184 bp overlap
PHOX2A 4 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 4 datasets
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 231 bp overlap
ChIP K562 ENCFF236IUS 409 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap
RELA 2 datasets
Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
RFX1 4 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 346 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 336 bp overlap
ChIP K562 ENCFF421AVO 317 bp overlap
ChIP K562 ENCFF809XVG 297 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 451 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 330 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 273 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 254 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 174 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 140 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 590 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 291 bp overlap
SOX10 2 datasets
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 268 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 447 bp overlap
SRF 1 dataset
ChIP K562 ENCFF766EOO 397 bp overlap
STAT3 2 datasets
Motif DE_48h DE_48h-STAT3_MA0144.3 9 bp overlap
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 220 bp overlap
Sox1 2 datasets
Motif DE_60h DE_60h-Sox1_MA0870.1 15 bp overlap
Motif DE_72h DE_72h-Sox1_MA0870.1 15 bp overlap
Stat4 2 datasets
Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 258 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 81 bp overlap
TAL1 9 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 247 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 201 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 240 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 224 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 221 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 198 bp overlap
ChIP K562 ENCFF620GMX 312 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 181 bp overlap
TCF12 1 dataset
ChIP K562 ENCFF931DJY 386 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 142 bp overlap
TRPS1 4 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
YY1 2 datasets
ChIP liver ENCFF400MBC 436 bp overlap
ChIP liver ENCFF400MBC 591 bp overlap
ZBTB7A 2 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 375 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 220 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 168 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 253 bp overlap
ZNF257 2 datasets
ChIP HEK293 GSE76494.ZNF257.HEK293 181 bp overlap
ChIP HEK293T GSE78099.ZNF257.HEK293T 231 bp overlap
ZNF684 2 datasets
Motif DE_60h DE_60h-ZNF684_MA1600.2 14 bp overlap
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
ZNF792 1 dataset
ChIP HEK293T GSE78099.ZNF792.HEK293T 53 bp overlap
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