chr1 : 219,563,746 219,564,301
555 bp 68 TFs 0 linked genes
This 555 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:219,558,746 – 219,569,301
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 120 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 159 bp overlap
ATF2 8 datasets
ChIP GM12878 ENCFF066HPG 119 bp overlap
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 212 bp overlap
ChIP HEK293 ENCFF194VKZ 83 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 165 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 234 bp overlap
ChIP HepG2 ENCFF955VER 157 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 190 bp overlap
ChIP K562 ENCFF139ZZG 104 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 215 bp overlap
ATF7 4 datasets
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 186 bp overlap
ChIP HepG2 ENCFF470FKK 113 bp overlap
ChIP MCF-7 ENCFF578WKB 114 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 205 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 225 bp overlap
BRD4 6 datasets
ChIP COLO-320 GSE73319.BRD4.COLO-320 255 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 186 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 241 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 283 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 198 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 313 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 128 bp overlap
ChIP HepG2 ENCFF175DFS 208 bp overlap
CEBPB 1 dataset
ChIP HepG2 ENCFF536NTI 189 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 522 bp overlap
CREB1 5 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 147 bp overlap
ChIP MCF-7 ENCFF341ZEM 109 bp overlap
ChIP MCF-7 ENCFF867SAS 102 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 198 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 182 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 126 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF798NMV 317 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 136 bp overlap
EP300 3 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 145 bp overlap
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 187 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 300 bp overlap
ESR1 4 datasets
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 341 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 377 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_F GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_F 160 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 288 bp overlap
FOXA1 14 datasets
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 52 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 137 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 127 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 127 bp overlap
ChIP HepG2 ENCFF207NVJ 156 bp overlap
ChIP HepG2 ENCFF740VZW 238 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 134 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 57 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 133 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 119 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 142 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 217 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 101 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 555 bp overlap
FOXA2 8 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 350 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 117 bp overlap
ChIP DE DE-FOXA2-1 480 bp overlap
ChIP DE DE-FOXA2-2 555 bp overlap
ChIP HepG2 ENCFF570ABM 209 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 237 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 422 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 555 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 168 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 406 bp overlap
ChIP DE DE-GATA4-2 455 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 448 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 427 bp overlap
ChIP DE DE-GATA6-2 523 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 371 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 409 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 555 bp overlap
GTF2F1 1 dataset
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 178 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 516 bp overlap
HIF1A 1 dataset
ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 106 bp overlap
HNF4A 1 dataset
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 132 bp overlap
JUN 4 datasets
ChIP Hep-G2 ENCSR000EEK.JUN.Hep-G2 112 bp overlap
ChIP HepG2 ENCFF401CRH 147 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 308 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 52 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 531 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 555 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 164 bp overlap
MTA2 2 datasets
ChIP RH4 GSE155861.MTA2.RH4 90 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 235 bp overlap
MYOD1 3 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 555 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 169 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 176 bp overlap
MYOG 1 dataset
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 69 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 263 bp overlap
NR5A1 2 datasets
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 176 bp overlap
ChIP HepG2 ENCFF970YZO 244 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 555 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 337 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 555 bp overlap
PDX1 4 datasets
ChIP H9 ERP004206.PDX1.H9 293 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 555 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 555 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 415 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 235 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 87 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 555 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 536 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 313 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 150 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 371 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 317 bp overlap
SMARCA4 1 dataset
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 182 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 99 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 448 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 532 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 261 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 283 bp overlap
SOX2 1 dataset
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 555 bp overlap
SP5 2 datasets
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 111 bp overlap
ChIP HepG2 ENCFF931FHV 203 bp overlap
SS18 5 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 122 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 151 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 555 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 465 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 290 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 80 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 153 bp overlap
TCF7 1 dataset
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 103 bp overlap
TCF7L2 1 dataset
ChIP LNCaP GSE51621.TCF7L2.LNCaP 96 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 217 bp overlap
TFAP4 2 datasets
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 236 bp overlap
ChIP HepG2 ENCFF932XOY 196 bp overlap
ZFX 1 dataset
ChIP MCF-7 ENCFF009NAJ 555 bp overlap
ZMYM3 1 dataset
ChIP Hep-G2 ENCSR848YWD.ZMYM3.Hep-G2 217 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 382 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 308 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 256 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 256 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 116 bp overlap
ChIP HepG2 ENCFF490FFQ 202 bp overlap
ZNF697 2 datasets
ChIP Hep-G2 ENCSR734WFB.ZNF697.Hep-G2 96 bp overlap
ChIP HepG2 ENCFF153LJW 231 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 209 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 168 bp overlap