chr13 : 66,926,255 – 66,926,988

733 bp 100 TFs 0 linked genes

This 733 bp open chromatin element has no linked target genes and is bound by 100 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

100 transcription factors

BARX1 1 dataset

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

BCL6B 3 datasets

ChIP HEK293 ENCFF555YRB 304 bp overlap

ChIP HEK293 ENCFF555YRB 103 bp overlap

ChIP HEK293 ENCSR673SGK.BCL6B.HEK293 244 bp overlap

BHLHE40 1 dataset

ChIP HEK293T ENCFF540EYG 72 bp overlap

BRD2 4 datasets

ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 576 bp overlap

ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 396 bp overlap

ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 180 bp overlap

ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 176 bp overlap

BRD4 5 datasets

ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 52 bp overlap

ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 309 bp overlap

ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 242 bp overlap

ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 73 bp overlap

ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 311 bp overlap

BSX 1 dataset

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

CHD7 2 datasets

ChIP WA01 ENCSR000AVA.CHD7.WA01 145 bp overlap

ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 74 bp overlap

CTCF 2 datasets

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 201 bp overlap

ChIP keratinocyte GSE154221.CTCF.keratinocyte 127 bp overlap

DLX1 1 dataset

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

Ddit3::Cebpa 1 dataset

Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap

Dlx2 1 dataset

Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap

ERG 5 datasets

ChIP HUVEC-C GSE128382.ERG.HUVEC-C 140 bp overlap

ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 126 bp overlap

ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 105 bp overlap

ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 70 bp overlap

ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 122 bp overlap

FEZF1 2 datasets

ChIP HEK293 ENCFF528YED 313 bp overlap

ChIP HEK293 GSE76494.FEZF1.HEK293 329 bp overlap

FLI1 1 dataset

ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 103 bp overlap

GBX2 1 dataset

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 86 bp overlap

HESX1 1 dataset

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

HIC1 1 dataset

ChIP HEK293 ENCFF252CFL 441 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

HOXA5 1 dataset

Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap

HOXA6 1 dataset

Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap

HOXA7 1 dataset

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

HOXB6 1 dataset

Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap

HOXB7 1 dataset

Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap

HOXB8 1 dataset

Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap

HOXD8 1 dataset

Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap

Hmx2 1 dataset

Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap

Hmx3 1 dataset

Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap

KMT2A 1 dataset

ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 486 bp overlap

LBX2 1 dataset

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

LHX2 3 datasets

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

ChIP retina_pigment GSE60024.LHX2.retina_pigment 189 bp overlap

ChIP retina_pigment GSE60024.LHX2.retina_pigment 136 bp overlap

MED1 1 dataset

ChIP VCaP_DHTTHZ1 GSE125245.MED1.VCaP_DHTTHZ1 286 bp overlap

MSX1 1 dataset

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

MZF1 1 dataset

ChIP HEK293 GSE76494.MZF1.HEK293 148 bp overlap

Msx3 1 dataset

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

NANOG 6 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 129 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 441 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 420 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 280 bp overlap

ChIP hESC GSE18292.NANOG.hESC 165 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 383 bp overlap

NFIL3 1 dataset

Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap

NKX2-1 1 dataset

ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 335 bp overlap

NR5A1 1 dataset

Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap

NUP98-HOXA9 2 datasets

ChIP HEK293-FT GSE62586.NUP98-HOXA9.HEK293-FT 209 bp overlap

ChIP HEK293-FT GSE62586.NUP98-HOXA9.HEK293-FT 417 bp overlap

Nobox 1 dataset

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

OSR2 1 dataset

ChIP HEK293 ENCFF875BDB 210 bp overlap

PAX3 1 dataset

Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap

PAX5 4 datasets

ChIP DOHH2 GSE69558.PAX5.DOHH2 221 bp overlap

ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 207 bp overlap

ChIP GM12892 ENCSR000BJI.PAX5.GM12892 127 bp overlap

ChIP OCI-Ly7 GSE69558.PAX5.OCI-Ly7 339 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 733 bp overlap

PHOX2B 1 dataset

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 347 bp overlap

PKNOX1 2 datasets

ChIP HEK293T ENCFF174WDB 245 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 309 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 309 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap

PRDM4 2 datasets

ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 258 bp overlap

ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 227 bp overlap

PRDM6 2 datasets

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 733 bp overlap

ChIP HEK293 GSE76494.PRDM6.HEK293 234 bp overlap

PSIP1 2 datasets

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 493 bp overlap

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 169 bp overlap

Pax7 1 dataset

Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap

Pgr 1 dataset

Motif DE_12h DE_12h-Pgr_MA2323.1 17 bp overlap

RAD21 2 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 269 bp overlap

ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 325 bp overlap

RAX 1 dataset

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

RELA 5 datasets

ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 51 bp overlap

ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 95 bp overlap

ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 98 bp overlap

ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 135 bp overlap

ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 51 bp overlap

REST 4 datasets

ChIP HEK293 ENCFF073DOT 176 bp overlap

ChIP HEK293 ENCSR896UBV.REST.HEK293 279 bp overlap

ChIP K-562 ENCSR000BMW.REST.K-562 104 bp overlap

ChIP WA01 ENCSR000BHM.REST.WA01 115 bp overlap

SMARCC1 4 datasets

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 244 bp overlap

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 165 bp overlap

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 338 bp overlap

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 286 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 269 bp overlap

SP5_Zebrafish 2 datasets

ChIP HEK293_Zebrafish_dDBD GSE121316.SP5_Zebrafish.HEK293_Zebrafish_dDBD 263 bp overlap

ChIP HEK293_Zebrafish_dDBD GSE121316.SP5_Zebrafish.HEK293_Zebrafish_dDBD 328 bp overlap

SP7 3 datasets

ChIP HEK293 ENCFF733RBE 535 bp overlap

ChIP HEK293 ENCFF733RBE 732 bp overlap

ChIP HEK293 ENCFF733RBE 281 bp overlap

SS18 1 dataset

ChIP Aska-SS GSE108025.SS18.Aska-SS 733 bp overlap

TCF7L2 1 dataset

ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 251 bp overlap

TP63 1 dataset

ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 336 bp overlap

TRIM28 5 datasets

ChIP HEK293 ENCFF265CEM 141 bp overlap

ChIP HEK293 ENCFF582MWI 409 bp overlap

ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 733 bp overlap

ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 426 bp overlap

ChIP U2OS ENCSR000EYC.TRIM28.U2OS 435 bp overlap

TSHZ1 2 datasets

ChIP HEK293 ENCFF893BGV 337 bp overlap

ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 251 bp overlap

WT1 2 datasets

ChIP HEK293 ENCFF906HIR 416 bp overlap

ChIP HEK293 ENCFF906HIR 263 bp overlap

YY1 1 dataset

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 50 bp overlap

ZBTB12 1 dataset

ChIP HEK293 ENCFF963HPT 331 bp overlap

ZBTB17 1 dataset

ChIP HEK293 ENCFF865LIO 329 bp overlap

ZBTB44 1 dataset

ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 733 bp overlap

ZEB2 1 dataset

ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 591 bp overlap

ZNF184 1 dataset

ChIP HEK293 ENCFF221CII 357 bp overlap

ZNF189 1 dataset

ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 231 bp overlap

ZNF213 1 dataset

ChIP HEK293 ENCSR295GRB.ZNF213.HEK293 556 bp overlap

ZNF24 1 dataset

ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 324 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 310 bp overlap

ZNF34 2 datasets

ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 266 bp overlap

ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 225 bp overlap

ZNF362 2 datasets

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 315 bp overlap

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 270 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 714 bp overlap

ZNF394 1 dataset

ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 268 bp overlap

ZNF418 1 dataset

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

ZNF449 1 dataset

ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 282 bp overlap

ZNF501 1 dataset

ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 261 bp overlap

ZNF518A 1 dataset

ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 158 bp overlap

ZNF549 1 dataset

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

ZNF580 1 dataset

ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 270 bp overlap

ZNF629 2 datasets

ChIP HEK293 ENCSR351NON.ZNF629.HEK293 291 bp overlap

ChIP HEK293 ENCSR351NON.ZNF629.HEK293 186 bp overlap

ZNF680 1 dataset

ChIP HEK293 GSE76494.ZNF680.HEK293 91 bp overlap

ZNF76 1 dataset

ChIP HEK293 ENCFF374TCG 451 bp overlap

ZNF843 2 datasets

ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 238 bp overlap

ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 236 bp overlap

ZSCAN29 1 dataset

Motif DE_12h DE_12h-ZSCAN29_MA1602.2 11 bp overlap

ZSCAN5C 2 datasets

ChIP HEK293 ENCFF343DTU 144 bp overlap

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 570 bp overlap

ZXDB 1 dataset

ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 157 bp overlap