chr1 : 218,439,553 – 218,439,932
379 bp 61 TFs 1 linked gene
This 379 bp open chromatin element is linked to TGFB2-OT1 and is bound by 61 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TGFB2-OT1 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:218,434,553 – 218,444,932
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
61 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 227 bp overlap
AR 3 datasets
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 203 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 312 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 379 bp overlap
ARNTL 2 datasets
ChIP Hep-G2 ENCSR794LVK.ARNTL.Hep-G2 258 bp overlap
ChIP HepG2 ENCFF217GCH 342 bp overlap
BRCA1 1 dataset
ChIP SH-EP_MYCNER_plusOHT GSE111905.BRCA1.SH-EP_MYCNER_plusOHT 86 bp overlap
BRD4 5 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 379 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 379 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 297 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 175 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 252 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 157 bp overlap
CTCF 43 datasets
ChIP D54 ENCSR000DKN.CTCF.D54 136 bp overlap
ChIP GM23338 ENCFF772DML 173 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H54 ENCFF255TVO 191 bp overlap
ChIP H9 ENCFF152GTF 295 bp overlap
ChIP HepG2 ENCFF757EKU 254 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 349 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 205 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 254 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 138 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 181 bp overlap
ChIP ascending aorta ENCFF451CCT 343 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 258 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 341 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 197 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 287 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 134 bp overlap
ChIP brain ENCFF163BBN 158 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 263 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 138 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 153 bp overlap
ChIP endodermal cell ENCFF471YCZ 312 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 245 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 331 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 205 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 205 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 304 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 292 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 362 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 360 bp overlap
ChIP heart left ventricle ENCFF354HOQ 358 bp overlap
ChIP heart right ventricle ENCFF435TKW 280 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 127 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 140 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 145 bp overlap
ChIP myotube ENCFF981UHL 286 bp overlap
ChIP myotube ENCFF981UHL 232 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 368 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 196 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 304 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 203 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 269 bp overlap
ChIP tibial-artery ENCSR079YAP.CTCF.tibial-artery 202 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 312 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 193 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 170 bp overlap
ESR1 7 datasets
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 201 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 189 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 186 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 199 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 257 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 199 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 243 bp overlap
FOXM1 2 datasets
ChIP MDA-MB-231 GSE40762.FOXM1.MDA-MB-231 173 bp overlap
ChIP MDA-MB-231_THIOS GSE40762.FOXM1.MDA-MB-231_THIOS 281 bp overlap
FOXO1 1 dataset
ChIP primary-chondrocyte GSE144026.FOXO1.primary-chondrocyte 294 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 205 bp overlap
HDAC1 1 dataset
ChIP Hep-G2 ENCSR750OWO.HDAC1.Hep-G2 143 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 117 bp overlap
HNF4A 5 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 159 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 144 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 140 bp overlap
ChIP Hep-G2 ENCSR000EEU.HNF4A.Hep-G2 134 bp overlap
ChIP HepG2 ENCFF146SSF 254 bp overlap
HOXB13 1 dataset
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 299 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 173 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 372 bp overlap
MAX 9 datasets
ChIP H1 ENCFF914VQY 188 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 235 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF479OHI 322 bp overlap
ChIP HepG2 ENCFF507HCX 379 bp overlap
ChIP Ishikawa ENCFF064TDQ 337 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 190 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 165 bp overlap
ChIP melanocyte GSE115845.MAX.melanocyte 196 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 188 bp overlap
MITF 2 datasets
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 183 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 205 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 255 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYCN 2 datasets
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 236 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 178 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 161 bp overlap
NFE2L2 1 dataset
ChIP A-375_A771726 GSE57431.NFE2L2.A-375_A771726 159 bp overlap
Nr2e3 1 dataset
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
PAXIP1 1 dataset
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 158 bp overlap
PGR 1 dataset
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 267 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 153 bp overlap
POLR2A 5 datasets
ChIP breast epithelium ENCFF045XXN 379 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 265 bp overlap
ChIP prostate gland ENCFF881OMH 183 bp overlap
ChIP prostate gland ENCFF881OMH 278 bp overlap
ChIP sigmoid colon ENCFF754JQR 305 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
RAD21 11 datasets
ChIP H1 ENCFF698EWO 221 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 130 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 160 bp overlap
ChIP HepG2 ENCFF906QIS 200 bp overlap
ChIP Ishikawa ENCFF570JVV 218 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 156 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 268 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 166 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 171 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 173 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 146 bp overlap
RBPJ 5 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 367 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 307 bp overlap
ChIP HCC1599 GSE116871.RBPJ.HCC1599 245 bp overlap
ChIP MDA-MB-157 GSE116868.RBPJ.MDA-MB-157 379 bp overlap
ChIP MDA-MB-157_GSI GSE116868.RBPJ.MDA-MB-157_GSI 331 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 119 bp overlap
ChIP neural cell ENCFF882LXX 353 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 332 bp overlap
SMAD1 2 datasets
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 205 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 150 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 111 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 146 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 135 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
STAG1 1 dataset
ChIP HepG2 ENCFF843EBZ 262 bp overlap
STAT3 1 dataset
ChIP A139 GSE85579.STAT3.A139 372 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 262 bp overlap
TFAP4 2 datasets
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 118 bp overlap
ChIP HepG2 ENCFF932XOY 281 bp overlap
TP53 1 dataset
Motif DE_12h DE_12h-TP53_MA0106.3 18 bp overlap
USF1 3 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 109 bp overlap
ChIP HepG2 ENCFF807KYJ 201 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap
ZBTB7B 1 dataset
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 152 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 152 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 196 bp overlap
ZNF574 1 dataset
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 379 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
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