chr13 : 51,328,373 – 51,328,843
470 bp 108 TFs 0 linked genes
This 470 bp open chromatin element has no linked target genes and is bound by 108 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:51,323,373 – 51,333,843
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 461 bp overlap
Ahr::Arnt 2 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 102 bp overlap
Bhlha15 2 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 204 bp overlap
CREBBP_M768 1 dataset
ChIP NCI-H3396_E2 GSE32349.CREBBP_M768.NCI-H3396_E2 57 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 384 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 375 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 288 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 425 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 411 bp overlap
CTCF 24 datasets
ChIP GM23338 ENCFF531QOI 248 bp overlap
ChIP GM23338 ENCFF772DML 165 bp overlap
ChIP H1 ENCFF230QSV 135 bp overlap
ChIP H1 ENCFF414GZI 135 bp overlap
ChIP H1 ENCFF764RHO 202 bp overlap
ChIP H9 ENCFF152GTF 265 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 206 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 64 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 325 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 201 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 294 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 279 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 222 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 106 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 176 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 107 bp overlap
ChIP endodermal cell ENCFF471YCZ 258 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 71 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 204 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 115 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 380 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 386 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 330 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 165 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 398 bp overlap
ChIP BLaER1 ENCFF274GAT 251 bp overlap
Crx 2 datasets
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
Dmbx1 2 datasets
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 161 bp overlap
ERF::NHLH1 2 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif ES_0h ES_0h-ERFNHLH1_MA1938.2 16 bp overlap
ERG 1 dataset
ChIP MCF-7 GSE23730.ERG.MCF-7 171 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 64 bp overlap
FOXH1 2 datasets
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
Motif ES_0h ES_0h-FOXH1_MA0479.2 8 bp overlap
Foxn1 3 datasets
Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap
Motif DE_72h DE_72h-Foxn1_MA1684.1 6 bp overlap
Motif ES_0h ES_0h-Foxn1_MA1684.1 6 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 208 bp overlap
GSC 2 datasets
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 282 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 437 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 224 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 470 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 398 bp overlap
KLF14 2 datasets
Motif DE_72h DE_72h-KLF14_MA0740.2 9 bp overlap
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF16 2 datasets
Motif DE_72h DE_72h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF17 2 datasets
Motif DE_72h DE_72h-KLF17_MA1514.2 14 bp overlap
Motif ES_0h ES_0h-KLF17_MA1514.2 14 bp overlap
KLF5 2 datasets
Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 278 bp overlap
MAZ 2 datasets
Motif DE_72h DE_72h-MAZ_MA1522.2 8 bp overlap
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 255 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 388 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 298 bp overlap
MYF5 2 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYOD1 3 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 214 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
MZF1 2 datasets
Motif DE_72h DE_72h-MZF1_MA0056.3 8 bp overlap
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 275 bp overlap
NFIA 3 datasets
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
Motif DE_72h DE_72h-NFIA_MA0670.2 6 bp overlap
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIB 2 datasets
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NFIC 2 datasets
Motif DE_12h DE_12h-NFIC_MA1527.2 15 bp overlap
Motif ES_0h ES_0h-NFIC_MA1527.2 15 bp overlap
NFIX 3 datasets
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Motif DE_72h DE_72h-NFIX_MA0671.2 6 bp overlap
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
NFYA 3 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif DE_72h DE_72h-NFYA_MA0060.4 8 bp overlap
Motif ES_0h ES_0h-NFYA_MA0060.4 8 bp overlap
NFYC 3 datasets
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
Motif DE_72h DE_72h-NFYC_MA1644.2 7 bp overlap
Motif ES_0h ES_0h-NFYC_MA1644.2 7 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NRF1 1 dataset
ChIP H1 ENCFF582PEJ 227 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
OTX1 2 datasets
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 5 datasets
Motif DE_72h DE_72h-OTX2_MA0712.3 7 bp overlap
Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap
ChIP WTC11 ENCFF634NAO 245 bp overlap
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 459 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 164 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 91 bp overlap
PBX3 3 datasets
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
Motif DE_72h DE_72h-PBX3_MA1114.2 11 bp overlap
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
PITX1 2 datasets
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX2 2 datasets
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
PKNOX1 3 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_72h DE_72h-PKNOX1_MA0782.3 10 bp overlap
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF833NJP 335 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 223 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 288 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 177 bp overlap
ChIP H1 ENCFF967OJF 227 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 295 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 243 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 383 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 173 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 191 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 127 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 168 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 100 bp overlap
RHOXF1 2 datasets
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 470 bp overlap
RUNX1 1 dataset
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 248 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 226 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 187 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 268 bp overlap
SOX13 2 datasets
Motif DE_72h DE_72h-SOX13_MA1120.2 7 bp overlap
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX2 3 datasets
Motif DE_72h DE_72h-SOX2_MA0143.5 7 bp overlap
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 278 bp overlap
SP3 2 datasets
Motif DE_72h DE_72h-SP3_MA0746.3 11 bp overlap
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP4 3 datasets
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
ChIP H1 ENCFF473YOB 470 bp overlap
SP5 3 datasets
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 2 datasets
Motif DE_72h DE_72h-SP8_MA0747.2 11 bp overlap
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
Sox3 2 datasets
Motif DE_72h DE_72h-Sox3_MA0514.3 7 bp overlap
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
TBP 3 datasets
ChIP H1 ENCFF859IIO 292 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 155 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 116 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
TEAD4 3 datasets
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 320 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 302 bp overlap
TRIM28 1 dataset
ChIP WA01 GSE78099.TRIM28.WA01 156 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 387 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 267 bp overlap
ZKSCAN3 2 datasets
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
Motif ES_0h ES_0h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 314 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 137 bp overlap
ZNF148 2 datasets
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 415 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 158 bp overlap
ZNF331 2 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap
ZNF454 3 datasets
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Motif DE_72h DE_72h-ZNF454_MA1712.2 17 bp overlap
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF75A 2 datasets
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
Motif ES_0h ES_0h-ZNF75A_MA2097.1 12 bp overlap
ZNF766 2 datasets
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
ZSCAN31 2 datasets
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Motif ES_0h ES_0h-ZSCAN31_MA1722.2 18 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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