chr12 : 9,685,181 – 9,685,630
449 bp 66 TFs 1 linked gene
This 449 bp open chromatin element is linked to NPM1P7 and is bound by 66 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NPM1P7 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:9,680,181 – 9,690,630
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 411 bp overlap
ChIP K562 ENCFF938UXQ 365 bp overlap
ATF7 1 dataset
ChIP K562 ENCFF308SKS 394 bp overlap
BCL11A 12 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 56 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 87 bp overlap
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 60 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 78 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 64 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 62 bp overlap
ChIP CD34_Day9_15min GSE104676.BCL11A.CD34_Day9_15min 64 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 83 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 81 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 77 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 104 bp overlap
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 156 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 400 bp overlap
ChIP K562 ENCFF963TXY 317 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 449 bp overlap
ChIP K562 ENCFF673OEZ 381 bp overlap
CC2D1A 2 datasets
ChIP K-562 ENCSR343IFJ.CC2D1A.K-562 200 bp overlap
ChIP K562 ENCFF567XUT 340 bp overlap
CCNT2 1 dataset
ChIP K562 ENCFF199GSZ 390 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 122 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 111 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 391 bp overlap
ChIP K562 ENCFF403WPG 225 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 378 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 79 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 270 bp overlap
DPF2 4 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 183 bp overlap
ChIP K562 ENCFF739JDE 197 bp overlap
ChIP K562 ENCFF739JDE 193 bp overlap
ChIP K562 ENCFF775HUO 304 bp overlap
E4F1 2 datasets
ChIP K562 ENCFF622HMZ 400 bp overlap
ChIP K562 ENCFF622HMZ 143 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 218 bp overlap
ChIP K562 ENCFF226VMS 317 bp overlap
ESRRA 1 dataset
ChIP K562 ENCFF968PEP 416 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 165 bp overlap
ChIP DE DE-FOXA2-2 209 bp overlap
ChIP HepG2 ENCFF533COJ 115 bp overlap
FOXA3 2 datasets
ChIP K562 ENCFF348SOM 184 bp overlap
ChIP K562 ENCFF781VSC 142 bp overlap
FOXK2 2 datasets
ChIP K562 ENCFF245WKP 179 bp overlap
ChIP K562 ENCFF851PFH 100 bp overlap
FOXM1 2 datasets
ChIP K-562 ENCSR429QPP.FOXM1.K-562 221 bp overlap
ChIP K562 ENCFF255RHV 222 bp overlap
GABPA 2 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 198 bp overlap
ChIP K562 ENCFF996TSW 265 bp overlap
GATA1 11 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 68 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 271 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 181 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 183 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 156 bp overlap
ChIP K562 ENCFF094CMK 245 bp overlap
ChIP erythroblast ENCFF867JAR 275 bp overlap
ChIP erythroblast ENCFF867JAR 207 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 391 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 203 bp overlap
GATA2 7 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 276 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 193 bp overlap
ChIP K562 ENCFF088XQT 315 bp overlap
ChIP K562 ENCFF513FTZ 253 bp overlap
ChIP K562 ENCFF544PCK 251 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 275 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 176 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 260 bp overlap
ChIP DE DE-GATA4-2 277 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 389 bp overlap
ChIP DE DE-GATA6-2 329 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 366 bp overlap
ChIP foregut GSE117136.GATA6.foregut 315 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 314 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF968WBH 147 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 217 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 177 bp overlap
ChIP K562 ENCFF744ALD 319 bp overlap
ChIP K562 ENCFF919OMP 449 bp overlap
KLF16 1 dataset
ChIP K562 ENCFF464PIV 318 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 252 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 193 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 154 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 261 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR390VGH.MNT.K-562 211 bp overlap
MTA2 1 dataset
ChIP K562 ENCFF880VZB 204 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR914NEI.MTA3.K-562 160 bp overlap
ChIP K562 ENCFF289UFB 312 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 396 bp overlap
NCOA1 1 dataset
ChIP K562 ENCFF962VHQ 309 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR910JAI.NCOR1.K-562 306 bp overlap
ChIP K-562 ENCSR798ILC.NCOR1.K-562 289 bp overlap
ChIP K562 ENCFF788MPU 269 bp overlap
ChIP K562 ENCFF866HRM 268 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 302 bp overlap
ChIP K562 ENCFF167YID 240 bp overlap
NR2F1 1 dataset
ChIP K562 ENCFF221HJH 400 bp overlap
NR2F2 3 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 124 bp overlap
ChIP K562 ENCFF004YPK 342 bp overlap
ChIP K562 ENCFF004YPK 134 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
PML 2 datasets
ChIP K-562 ENCSR000BQY.PML.K-562 158 bp overlap
ChIP K562 ENCFF801LKH 386 bp overlap
POLR2A 2 datasets
ChIP K562 ENCFF262YXJ 403 bp overlap
ChIP K562 ENCFF514URW 181 bp overlap
RAD21 1 dataset
ChIP K562 ENCFF169SQI 154 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 294 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 358 bp overlap
ChIP K562 ENCFF628RBP 153 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 274 bp overlap
ChIP K562 ENCFF506JCB 268 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 293 bp overlap
ChIP K562 ENCFF690CFF 264 bp overlap
SOX6 2 datasets
ChIP K562 ENCFF059YCJ 192 bp overlap
ChIP K562 ENCFF059YCJ 142 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 84 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 341 bp overlap
TAF1 1 dataset
ChIP K-562 ENCSR000BKS.TAF1.K-562 156 bp overlap
TAL1 13 datasets
ChIP CD34 GSE52924.TAL1.CD34 279 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 269 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 299 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 284 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 191 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 164 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 176 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 166 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 168 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 166 bp overlap
ChIP K562 ENCFF620GMX 331 bp overlap
ChIP K562 ENCFF661CCK 166 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 216 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF899VEC 315 bp overlap
TCF12 4 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 311 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 229 bp overlap
ChIP K562 ENCFF909RDY 198 bp overlap
ChIP K562 ENCFF931DJY 317 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 152 bp overlap
ChIP K562 ENCFF319QZT 270 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 298 bp overlap
TRIM24 4 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 222 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 204 bp overlap
ChIP K562 ENCFF284DKY 302 bp overlap
ChIP K562 ENCFF616RIL 208 bp overlap
TRIM28 1 dataset
ChIP K562 ENCFF172UPN 364 bp overlap
YY1 3 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 71 bp overlap
ChIP K562 ENCFF199FNC 138 bp overlap
ChIP K562 ENCFF660QRE 117 bp overlap
ZBTB7A 4 datasets
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 395 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 151 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 108 bp overlap
ChIP K562 ENCFF579ZGM 218 bp overlap
ZEB2 2 datasets
ChIP K562 ENCFF795CMH 241 bp overlap
ChIP K562 ENCFF975RXS 117 bp overlap
ZMIZ1 1 dataset
ChIP K562 ENCFF647WJV 299 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 313 bp overlap
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