chr12 : 905,407 906,187
780 bp 85 TFs 1 linked gene
This 780 bp open chromatin element is linked to WNK1 and is bound by 85 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
WNK1 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:900,407 – 911,187
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 548 bp overlap
ARID5B 1 dataset
ChIP Jurkat GSE97512.ARID5B.Jurkat 260 bp overlap
ARNTL 2 datasets
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 282 bp overlap
ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 302 bp overlap
ATF4 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 266 bp overlap
BCL11A 2 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 134 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 74 bp overlap
BRD4 5 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 518 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 524 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 273 bp overlap
ChIP SEM GSE83671.BRD4.SEM 192 bp overlap
CDK7 2 datasets
ChIP Jurkat GSE83777.CDK7.Jurkat 543 bp overlap
ChIP Jurkat_DMSO GSE60027.CDK7.Jurkat_DMSO 206 bp overlap
CEBPA 4 datasets
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 243 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.CEBPA.Kasumi-1_SIRUNX1ETO 153 bp overlap
ChIP MV4-11 GSE88746.CEBPA.MV4-11 203 bp overlap
ChIP SKH1_CEBPA-ER GSE102697.CEBPA.SKH1_CEBPA-ER 258 bp overlap
CEBPB 2 datasets
ChIP HL-60_CEBPB_overexpressed GSE100486.CEBPB.HL-60_CEBPB_overexpressed 143 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 252 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 299 bp overlap
CTCF 3 datasets
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 125 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 288 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 242 bp overlap
Cebpa 19 datasets
ChIP BLaER1 ENCFF031ISE 571 bp overlap
ChIP BLaER1 ENCFF093OYK 780 bp overlap
ChIP BLaER1 ENCFF140EYR 437 bp overlap
ChIP BLaER1 ENCFF250ODG 441 bp overlap
ChIP BLaER1 ENCFF262VBH 277 bp overlap
ChIP BLaER1 ENCFF274GAT 641 bp overlap
ChIP BLaER1 ENCFF335XTP 718 bp overlap
ChIP BLaER1 ENCFF341QPD 188 bp overlap
ChIP BLaER1 ENCFF346MCV 405 bp overlap
ChIP BLaER1 ENCFF364PUR 612 bp overlap
ChIP BLaER1 ENCFF399AYC 166 bp overlap
ChIP BLaER1 ENCFF419EBE 485 bp overlap
ChIP BLaER1 ENCFF419EBE 331 bp overlap
ChIP BLaER1 ENCFF460KDD 302 bp overlap
ChIP BLaER1 ENCFF508JZF 274 bp overlap
ChIP BLaER1 ENCFF798NMV 489 bp overlap
ChIP BLaER1 ENCFF844FIP 551 bp overlap
ChIP BLaER1 ENCFF858JKM 381 bp overlap
ChIP BLaER1 ENCFF896HSY 720 bp overlap
EBF1 2 datasets
ChIP MUTUL GSE75503.EBF1.MUTUL 158 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 406 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 184 bp overlap
ChIP hESC GSE26097.EOMES.hESC 237 bp overlap
ERG 4 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 595 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 224 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 248 bp overlap
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 183 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 242 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 618 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 548 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 94 bp overlap
FLI1 4 datasets
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 333 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 422 bp overlap
ChIP NB4 GSE23730.FLI1.NB4 343 bp overlap
ChIP SEM GSE117864.FLI1.SEM 263 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP DE DE-FOXA2-1 309 bp overlap
ChIP DE DE-FOXA2-2 291 bp overlap
ChIP DE DE-FOXA2-2 343 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 268 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 220 bp overlap
ChIP erythroblast ENCFF867JAR 355 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 315 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 283 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 196 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 307 bp overlap
ChIP DE DE-GATA4-2 297 bp overlap
ChIP DE DE-GATA4-2 273 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 247 bp overlap
ChIP DE DE-GATA6-1 253 bp overlap
ChIP DE DE-GATA6-2 266 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 259 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 780 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 321 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 360 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 780 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 321 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 360 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 91 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 126 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 159 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 256 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 279 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 780 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 577 bp overlap
INTS13 1 dataset
ChIP HL-60 GSE106359.INTS13.HL-60 264 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 603 bp overlap
ChIP NB4 GSE63484.JMJD1C.NB4 303 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 483 bp overlap
KMT2A 6 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 350 bp overlap
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 379 bp overlap
ChIP L826 GSE83671.KMT2A.L826 363 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 215 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 219 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 309 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 270 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 319 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 256 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 207 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 183 bp overlap
MAX 2 datasets
ChIP NB4 ENCFF966MWB 277 bp overlap
ChIP NB4 ENCSR000EHS.MAX.NB4 102 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 208 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 501 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 208 bp overlap
MEIS1 1 dataset
ChIP SEM GSE38339.MEIS1.SEM 198 bp overlap
MITF 1 dataset
ChIP 501-mel GSE61965.MITF.501-mel 186 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 579 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 509 bp overlap
ChIP SEM GSE117864.MYB.SEM 201 bp overlap
MYC 2 datasets
ChIP Jurkat GSE83777.MYC.Jurkat 400 bp overlap
ChIP NB4 ENCFF142PRP 317 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 651 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 176 bp overlap
NR3C1 2 datasets
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 259 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 236 bp overlap
NR5A2 2 datasets
ChIP A-549 ENCSR190GIW.NR5A2.A-549 298 bp overlap
ChIP A549 ENCFF834RVE 321 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 269 bp overlap
PAX5 6 datasets
ChIP GM12878 ENCFF482PUW 233 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 184 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 131 bp overlap
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 124 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 780 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 718 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 341 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 92 bp overlap
POLR2A 10 datasets
ChIP GM12878 ENCFF521FXC 500 bp overlap
ChIP GM12892 ENCFF245LYF 545 bp overlap
ChIP GM12892 ENCFF542ZFO 545 bp overlap
ChIP GM18505 ENCFF311CYB 367 bp overlap
ChIP H1 ENCFF566JSR 389 bp overlap
ChIP H1 ENCFF566JSR 631 bp overlap
ChIP HL-60 ENCFF321XKE 195 bp overlap
ChIP HL-60 ENCFF321XKE 342 bp overlap
ChIP spleen ENCFF044PYR 336 bp overlap
ChIP spleen ENCFF446ZGT 502 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 197 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 156 bp overlap
REST 1 dataset
ChIP HL-60 ENCFF589LOF 292 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 655 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 296 bp overlap
RUNX1 7 datasets
ChIP 697 GSE138031.RUNX1.697 274 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 696 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 243 bp overlap
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 563 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 600 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 453 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 152 bp overlap
RUNX1T1 4 datasets
ChIP CD34 GSE80773.RUNX1T1.CD34 203 bp overlap
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 337 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 401 bp overlap
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 153 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 163 bp overlap
SMAD2-3 5 datasets
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 160 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 421 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 280 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 780 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 780 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 780 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 780 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 780 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 780 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 404 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 247 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 159 bp overlap
SMARCA4 7 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 648 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 545 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 564 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 481 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 508 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 532 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 493 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 780 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 656 bp overlap
SPI1 7 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 183 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 378 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 569 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 292 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 267 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 285 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 780 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 780 bp overlap
STAT3 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 155 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 61 bp overlap
TAL1 4 datasets
ChIP CD34 GSE52924.TAL1.CD34 187 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 123 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 518 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 240 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 125 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 305 bp overlap
TCF3 2 datasets
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 508 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 613 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 122 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 252 bp overlap
TOP2A 1 dataset
ChIP KG-1_etoposide GSE114048.TOP2A.KG-1_etoposide 101 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 315 bp overlap
YY1 1 dataset
ChIP ALL GSE145549.YY1.ALL 71 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 445 bp overlap
ChIP K562 ENCFF427SDV 482 bp overlap
ChIP K562 ENCFF875HLX 465 bp overlap
ZNF143 4 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 171 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 161 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 192 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 188 bp overlap