chr11 : 87,082,981 – 87,083,363
382 bp 69 TFs 0 linked genes
This 382 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:87,077,981 – 87,088,363
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 142 bp overlap
ATF4 3 datasets
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap
Motif ES_0h ES_0h-ATF4_MA0833.3 10 bp overlap
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
BCL11A 4 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 177 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 154 bp overlap
BCL6 2 datasets
Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap
Motif ES_0h ES_0h-BCL6_MA0463.3 13 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 256 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 223 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 186 bp overlap
BRCA1 2 datasets
ChIP H1 ENCFF288NOI 268 bp overlap
ChIP WA01 ENCSR000EBX.BRCA1.WA01 221 bp overlap
BRD4 1 dataset
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 128 bp overlap
CDK9 1 dataset
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 221 bp overlap
CEBPG 3 datasets
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap
Motif ES_0h ES_0h-CEBPG_MA1636.2 10 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 382 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 320 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 157 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 116 bp overlap
CRX 2 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 192 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 253 bp overlap
DUX4 3 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 253 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 277 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 217 bp overlap
ChIP hESC GSE17917.EP300.hESC 352 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 342 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 274 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 270 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 195 bp overlap
FOXA1 2 datasets
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 162 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 196 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 382 bp overlap
ChIP DE DE-FOXA2-2 382 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 258 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 140 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 140 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE133072.GATA3.MCF-7 63 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 382 bp overlap
ChIP DE DE-GATA4-2 382 bp overlap
ChIP foregut GSE117136.GATA4.foregut 305 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 382 bp overlap
ChIP DE DE-GATA6-2 382 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 382 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 382 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 382 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 382 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 382 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 382 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 366 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 197 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 226 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 75 bp overlap
Hmx1 3 datasets
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap
Motif ES_0h ES_0h-Hmx1_MA0896.2 9 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 143 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 282 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 241 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 302 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 158 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 179 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 253 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 265 bp overlap
ChIP H1 ENCFF747ZPQ 111 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 382 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 308 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 270 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 382 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 382 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 382 bp overlap
ChIP hESC GSE18292.NANOG.hESC 220 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
OTX2 2 datasets
ChIP WTC11 ENCFF634NAO 245 bp overlap
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 327 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU4F2 2 datasets
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap
POU5F1 8 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 288 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 290 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 186 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 143 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 286 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 125 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 246 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 214 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 274 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 276 bp overlap
RELA 2 datasets
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 202 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 269 bp overlap
RUNX3 2 datasets
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
Motif ES_0h ES_0h-RUNX3_MA0684.3 8 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 367 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 211 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 317 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 258 bp overlap
SMARCA4 5 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 275 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 282 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 225 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 255 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 279 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 237 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 297 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 317 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 290 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 271 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 235 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 349 bp overlap
SOX2 7 datasets
ChIP H9 GSE46837.SOX2.H9 249 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 310 bp overlap
ChIP hESC GSE18292.SOX2.hESC 174 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 299 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 290 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 263 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 251 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 307 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 266 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 52 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 317 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 188 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 155 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 250 bp overlap
TCF7L1 2 datasets
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 264 bp overlap
ZNF384 2 datasets
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 272 bp overlap
ZNF549 3 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF652 3 datasets
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
Motif ES_0h ES_0h-ZNF652_MA1657.2 9 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
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