chr11 : 13,283,580 – 13,284,034

454 bp 76 TFs 2 linked genes

This 454 bp open chromatin element is linked to BMAL1 and ENSG00000290083 and is bound by 76 transcription factors.

Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
BMAL1		5.9 kb	Proximal	Proximity
ENSG00000290083		6.2 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

76 transcription factors

AR 1 dataset

ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 219 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 336 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 158 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 327 bp overlap

BRD4 1 dataset

ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 200 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000EBU.CHD1.WA01 162 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 176 bp overlap

CTCFL 1 dataset

Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 251 bp overlap

ELF1 1 dataset

Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap

ELK1::SREBF2 1 dataset

Motif DE_12h DE_12h-ELK1SREBF2_MA1933.2 15 bp overlap

EP300 4 datasets

ChIP H1 ENCFF927IYK 297 bp overlap

ChIP H1 ENCFF937OPV 205 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 255 bp overlap

ChIP WA01 ENCSR000AUQ.EP300.WA01 133 bp overlap

ERF::FOXI1 1 dataset

Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap

ETS1 1 dataset

Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap

ETS2 1 dataset

Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA1 1 dataset

ChIP LNCaP_M253K GSE133386.FOXA1.LNCaP_M253K 86 bp overlap

FOXJ2::ELF1 1 dataset

Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::FLI1 1 dataset

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 250 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 390 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 343 bp overlap

GRHL2 1 dataset

Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap

IKZF1 1 dataset

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 221 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 384 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 454 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 450 bp overlap

ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 193 bp overlap

JUND 2 datasets

ChIP WA01 ENCSR000EBZ.JUND.WA01 168 bp overlap

ChIP WA01 ENCSR000BKP.JUND.WA01 172 bp overlap

KLF5 3 datasets

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

ChIP HEK293_E419K GSE88976.KLF5.HEK293_E419K 203 bp overlap

ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 221 bp overlap

NANOG 2 datasets

ChIP WA01 ERP004238.NANOG.WA01 183 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 249 bp overlap

NIPBL 1 dataset

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 235 bp overlap

PAX5 1 dataset

ChIP GM12878 ENCSR000BHD.PAX5.GM12878 111 bp overlap

PAX6 1 dataset

Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap

PAX9 1 dataset

Motif DE_12h DE_12h-PAX9_MA0781.2 16 bp overlap

PGR 1 dataset

Motif DE_12h DE_12h-PGR_MA2327.1 9 bp overlap

POU5F1 1 dataset

ChIP hiPSC GSE56567.POU5F1.hiPSC 289 bp overlap

PRDM10 1 dataset

ChIP HEK293 ENCFF145WQQ 451 bp overlap

RAD21 1 dataset

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 131 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 170 bp overlap

REST 1 dataset

ChIP WA01 ENCSR000BHM.REST.WA01 256 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 163 bp overlap

SP1 3 datasets

Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap

ChIP H1 ENCFF263FUH 321 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 321 bp overlap

SP4 1 dataset

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

SP5 2 datasets

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SPDEF 1 dataset

Motif DE_12h DE_12h-SPDEF_MA0686.2 10 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 229 bp overlap

TBP 3 datasets

ChIP WA01 ENCSR000ECB.TBP.WA01 151 bp overlap

ChIP hESC GSE122298.TBP.hESC 135 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 120 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 296 bp overlap

TRIM28 1 dataset

ChIP hESC GSE115387.TRIM28.hESC 194 bp overlap

USF2 1 dataset

ChIP K-562 GSE111469.USF2.K-562 249 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 337 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 270 bp overlap

ZBTB24 1 dataset

Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap

ZIC1 1 dataset

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 214 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF175 1 dataset

Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap

ZNF213 1 dataset

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

ZNF257 1 dataset

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

ZNF263 1 dataset

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

ZNF341 3 datasets

ChIP HEK293 ENCFF944VMC 329 bp overlap

ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 396 bp overlap

ChIP HEK293 GSE76494.ZNF341.HEK293 226 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 317 bp overlap

ZNF44 1 dataset

ChIP HEK293T GSE78099.ZNF44.HEK293T 241 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 307 bp overlap

ZNF467 1 dataset

ChIP HEK293 GSE76494.ZNF467.HEK293 192 bp overlap

ZNF574 1 dataset

Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap

ZNF701 1 dataset

Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap

ZNF768 1 dataset

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

ZSCAN16 1 dataset

ChIP HEK293 GSE76494.ZSCAN16.HEK293 64 bp overlap