chr9 : 71,744,708 – 71,745,202
494 bp 104 TFs 0 linked genes
This 494 bp open chromatin element has no linked target genes and is bound by 104 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:71,739,708 – 71,750,202
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
104 transcription factors
Source
Cell type
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 123 bp overlap
ChIP HepG2 ENCFF773YDL 123 bp overlap
Atf3 2 datasets
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
Motif DE_24h DE_24h-Atf3_MA1988.2 7 bp overlap
BACH1 2 datasets
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
Motif DE_24h DE_24h-BACH1_MA1633.2 9 bp overlap
BACH2 2 datasets
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
Motif DE_24h DE_24h-BACH2_MA1101.3 11 bp overlap
BATF 2 datasets
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
Motif DE_24h DE_24h-BATF_MA1634.2 7 bp overlap
BATF3 2 datasets
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
Motif DE_24h DE_24h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 2 datasets
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_24h DE_24h-BATFJUN_MA0462.3 7 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 202 bp overlap
BNC2 2 datasets
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
Motif DE_24h DE_24h-BNC2_MA1928.2 7 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 195 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 286 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 135 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 258 bp overlap
ChIP BLaER1 ENCFF460KDD 386 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 186 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 230 bp overlap
ESR1_pS118 1 dataset
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 494 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
Motif DE_24h DE_24h-FOS_MA0476.2 8 bp overlap
FOS::JUN 2 datasets
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
Motif DE_24h DE_24h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 2 datasets
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
Motif DE_24h DE_24h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 2 datasets
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
Motif DE_24h DE_24h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 2 datasets
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
Motif DE_24h DE_24h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 2 datasets
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
Motif DE_24h DE_24h-FOSL1_MA0477.3 9 bp overlap
FOSL1::JUN 2 datasets
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
Motif DE_24h DE_24h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 2 datasets
Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap
Motif DE_24h DE_24h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL1::JUND 2 datasets
Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap
Motif DE_24h DE_24h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 3 datasets
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
Motif DE_24h DE_24h-FOSL2_MA0478.2 10 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 121 bp overlap
FOSL2::JUN 2 datasets
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 2 datasets
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 2 datasets
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
Motif DE_24h DE_24h-FOSL2JUND_MA1144.2 9 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 189 bp overlap
Foxl2 2 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif DE_24h DE_24h-Foxl2_MA1607.2 10 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000EWG.GATA2.K-562 116 bp overlap
Gfi1B 2 datasets
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_24h DE_24h-Gfi1B_MA0483.2 10 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 300 bp overlap
HOXB13 2 datasets
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
IFNA1 1 dataset
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 57 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 274 bp overlap
ChIP K562 ENCFF771OHZ 370 bp overlap
JDP2 2 datasets
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
Motif DE_24h DE_24h-JDP2_MA0655.1 9 bp overlap
JUN 5 datasets
ChIP A549 ENCFF846DUV 451 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 382 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 470 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 268 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 464 bp overlap
JUN::JUNB 2 datasets
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
Motif DE_24h DE_24h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 2 datasets
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
Motif DE_24h DE_24h-JUNB_MA0490.3 9 bp overlap
JUND 4 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Motif DE_24h DE_24h-JUND_MA0491.3 9 bp overlap
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 115 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 111 bp overlap
Jun 2 datasets
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
Motif DE_24h DE_24h-Jun_MA0489.3 8 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 186 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif DE_24h DE_24h-KLF9_MA1107.3 11 bp overlap
MAF::NFE2 2 datasets
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_24h DE_24h-MAFNFE2_MA0501.2 11 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 273 bp overlap
MAFG::NFE2L1 2 datasets
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_24h DE_24h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 2 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 235 bp overlap
MEF2A 2 datasets
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
Motif DE_24h DE_24h-MEF2A_MA0052.5 10 bp overlap
MEF2C 2 datasets
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
Motif DE_24h DE_24h-MEF2C_MA0497.2 11 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 156 bp overlap
Mafg 2 datasets
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Motif DE_24h DE_24h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 203 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 215 bp overlap
NFE2 5 datasets
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
Motif DE_24h DE_24h-NFE2_MA0841.2 10 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 174 bp overlap
ChIP K562 ENCFF163BSI 265 bp overlap
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 77 bp overlap
NFYB 2 datasets
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Motif DE_24h DE_24h-NFYB_MA0502.3 9 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 150 bp overlap
Nfe2l2 2 datasets
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Motif DE_24h DE_24h-Nfe2l2_MA0150.3 11 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 289 bp overlap
POLR2A 2 datasets
ChIP spleen ENCFF044PYR 290 bp overlap
ChIP upper lobe of left lung ENCFF095BJW 371 bp overlap
POU2F1 3 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif DE_24h DE_24h-POU2F1_MA0785.2 9 bp overlap
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
POU2F2 3 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif DE_24h DE_24h-POU2F2_MA0507.3 13 bp overlap
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
POU2F3 3 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif DE_24h DE_24h-POU2F3_MA0627.3 9 bp overlap
Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap
POU3F1 3 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
POU3F2 3 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif DE_24h DE_24h-POU3F2_MA0787.1 12 bp overlap
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
POU3F4 3 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif DE_24h DE_24h-POU3F4_MA0789.1 9 bp overlap
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
POU5F1 4 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
Motif DE_24h DE_24h-POU5F1_MA1115.2 7 bp overlap
Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 470 bp overlap
POU5F1B 3 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_24h DE_24h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 271 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 152 bp overlap
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 152 bp overlap
RBM22 3 datasets
ChIP HepG2 ENCFF292RVQ 494 bp overlap
ChIP HepG2 ENCFF561IAJ 494 bp overlap
ChIP HepG2 ENCFF561IAJ 52 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP KB_IL GSE52469.RELA.KB_IL 150 bp overlap
Runx1 2 datasets
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap
SCRT1 2 datasets
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
Motif DE_24h DE_24h-SCRT1_MA0743.3 10 bp overlap
SCRT2 2 datasets
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
Motif DE_24h DE_24h-SCRT2_MA0744.3 10 bp overlap
SMAD2 5 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 361 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 283 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 422 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 494 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 494 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 400 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 494 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 250 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 303 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 185 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 170 bp overlap
SOX10 4 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_24h DE_24h-SOX10_MA0442.3 6 bp overlap
Motif DE_24h DE_24h-SOX10_MA0442.3 6 bp overlap
STAT3 3 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif DE_24h DE_24h-STAT3_MA0144.3 9 bp overlap
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 143 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 228 bp overlap
TP53 2 datasets
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 77 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 283 bp overlap
ChIP K562 ENCFF875HLX 65 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 297 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 240 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 217 bp overlap
ZNF574 3 datasets
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
Motif DE_24h DE_24h-ZNF574_MA1982.2 14 bp overlap
Motif DE_36h DE_36h-ZNF574_MA1982.2 14 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 337 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_24h DE_24h-ZNF708_MA1730.2 9 bp overlap
ZNF75A 2 datasets
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_24h DE_24h-ZNF75A_MA2097.1 12 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
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