chr1 : 172,431,943 172,432,187
244 bp 66 TFs 0 linked genes
This 244 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:172,426,943 – 172,437,187
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 244 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 103 bp overlap
ARID2 1 dataset
ChIP HepG2 ENCFF317ZHO 143 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 244 bp overlap
ARNT 1 dataset
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 183 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 244 bp overlap
BORCS8,MEF2B 1 dataset
ChIP HepG2 ENCFF255VGS 244 bp overlap
CCDC6 2 datasets
ChIP HepG2 ENCFF751JSA 244 bp overlap
ChIP HepG2 ENCFF751JSA 244 bp overlap
CEBPG 1 dataset
ChIP MCF-7 ENCFF155HZI 129 bp overlap
CTCF 1 dataset
ChIP esophagus squamous epithelium ENCFF571ODZ 122 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 61 bp overlap
ChIP BLaER1 ENCFF093OYK 122 bp overlap
ChIP BLaER1 ENCFF335XTP 166 bp overlap
ChIP BLaER1 ENCFF364PUR 145 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCFF712EXQ 125 bp overlap
E2F4 1 dataset
ChIP HepG2 ENCFF311TOD 244 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCFF687CWI 108 bp overlap
EP300 1 dataset
ChIP MCF-7 ENCFF508OAU 133 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 80 bp overlap
FOXA1 20 datasets
ChIP HepG2 ENCFF207NVJ 173 bp overlap
ChIP HepG2 ENCFF361KNY 76 bp overlap
ChIP HepG2 ENCFF740VZW 166 bp overlap
ChIP MCF-7 ENCFF465LTH 103 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 242 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 173 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 206 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 103 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 171 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 174 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 164 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 125 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 136 bp overlap
ChIP MCF-7_shCTRL GSE132432.FOXA1.MCF-7_shCTRL 215 bp overlap
ChIP MCF-7_shNR2F2 GSE132432.FOXA1.MCF-7_shNR2F2 244 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 150 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 240 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 234 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 208 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 244 bp overlap
ChIP DE DE-FOXA2-2 244 bp overlap
ChIP HepG2 ENCFF533COJ 120 bp overlap
ChIP HepG2 ENCFF570ABM 198 bp overlap
ChIP HepG2 ENCFF894AYY 161 bp overlap
FOXA3 2 datasets
ChIP HepG2 ENCFF005KGL 244 bp overlap
ChIP K562 ENCFF781VSC 217 bp overlap
FOXJ2 1 dataset
ChIP K562 ENCFF457GZC 244 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 244 bp overlap
FOXP4 1 dataset
ChIP HepG2 ENCFF462ULY 244 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF437NQS 102 bp overlap
GTF2F1 1 dataset
ChIP MCF-7 ENCFF576OTX 215 bp overlap
HCFC1 1 dataset
ChIP MCF-7 ENCFF595ZTV 244 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCFF881POI 114 bp overlap
KDM5B 1 dataset
ChIP HepG2 ENCFF706LUI 244 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 241 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 244 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 244 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCFF169IXS 137 bp overlap
MAZ 2 datasets
ChIP MCF-7 ENCFF913ACQ 106 bp overlap
ChIP MCF-7 ENCFF913ACQ 244 bp overlap
MNT 1 dataset
ChIP MCF-7 ENCFF144ZFZ 244 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 51 bp overlap
PGR 3 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 68 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 121 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 76 bp overlap
PKNOX1 1 dataset
ChIP MCF-7 ENCFF116OCS 142 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF384GAB 244 bp overlap
RAD21 1 dataset
ChIP MCF-7 ENCFF694KOM 75 bp overlap
RCOR1 2 datasets
ChIP MCF-7 ENCFF833PNP 59 bp overlap
ChIP MCF-7 ENCFF833PNP 244 bp overlap
RELA 4 datasets
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 68 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 73 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 75 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 173 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCFF782EZS 215 bp overlap
RREB1 1 dataset
ChIP HepG2 ENCFF986CSN 244 bp overlap
SIN3A 2 datasets
ChIP MCF-7 ENCFF521RDC 157 bp overlap
ChIP MCF-7 ENCFF521RDC 244 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 56 bp overlap
SOX6 2 datasets
ChIP HepG2 ENCFF767OCK 244 bp overlap
ChIP HepG2 ENCFF767OCK 57 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCFF827PZY 57 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 229 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 239 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 223 bp overlap
TCF12 1 dataset
ChIP MCF-7 ENCFF329MRX 122 bp overlap
TFDP2 1 dataset
ChIP HepG2 ENCFF794WDW 244 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 244 bp overlap
ZEB1 1 dataset
ChIP HepG2 ENCFF808RQT 210 bp overlap
ZFP91 2 datasets
ChIP HepG2 ENCFF012CME 244 bp overlap
ChIP HepG2 ENCFF012CME 244 bp overlap
ZFX 4 datasets
ChIP HepG2 ENCFF016NZF 244 bp overlap
ChIP MCF-7 ENCFF009NAJ 244 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 244 bp overlap
ChIP MCF-7 ENCSR435OQD.ZFX.MCF-7 91 bp overlap
ZFY 1 dataset
ChIP HepG2 ENCFF106ELT 244 bp overlap
ZHX2 1 dataset
ChIP MCF-7 ENCFF733XRY 134 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 244 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 163 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 167 bp overlap
ZNF281 2 datasets
ChIP HepG2 ENCFF585QNU 194 bp overlap
ChIP K562 ENCFF594VNM 244 bp overlap
ZNF444 2 datasets
ChIP MCF-7 ENCFF602QFR 244 bp overlap
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 119 bp overlap
ZNF574 3 datasets
ChIP HepG2 ENCFF206MMY 244 bp overlap
ChIP HepG2 ENCFF206MMY 127 bp overlap
ChIP MCF-7 ENCFF293CGZ 183 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 244 bp overlap
ChIP MCF-7 ENCFF440BFX 244 bp overlap
ZNF7 1 dataset
ChIP K562 ENCFF096OHS 231 bp overlap
ZNF770 1 dataset
ChIP HepG2 ENCFF233UVH 244 bp overlap