chr8 : 98,294,747 98,294,885
138 bp 65 TFs 1 linked gene
This 138 bp open chromatin element is linked to NIPAL2 and is bound by 65 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NIPAL2 637 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:98,289,747 – 98,299,885
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 ERP001226.AR.MCF-7 128 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 138 bp overlap
ARID1A 3 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 138 bp overlap
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 138 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 138 bp overlap
ARID2 1 dataset
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 138 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 138 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 54 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 69 bp overlap
BRD2 1 dataset
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 68 bp overlap
BRD4 1 dataset
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 138 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 132 bp overlap
CTBP1 2 datasets
ChIP MCF-7 ENCFF969VBY 95 bp overlap
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 138 bp overlap
CTCF 5 datasets
ChIP C4-2B ENCFF821XVN 138 bp overlap
ChIP C4-2B ENCFF821XVN 138 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 87 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 70 bp overlap
ChIP stomach ENCFF918GTC 58 bp overlap
CUX1 1 dataset
ChIP MCF-7 ENCSR017CEO.CUX1.MCF-7 138 bp overlap
DPF2 2 datasets
ChIP MCF-7 ENCFF712EXQ 138 bp overlap
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 138 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 93 bp overlap
ESR1 24 datasets
ChIP MCF-7 ERP000209.ESR1.MCF-7 123 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 128 bp overlap
ChIP MCF-7-Luc_E2 GSE78284.ESR1.MCF-7-Luc_E2 99 bp overlap
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 127 bp overlap
ChIP MCF-7_E2 GSE102410.ESR1.MCF-7_E2 138 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 112 bp overlap
ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 92 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 97 bp overlap
ChIP MCF-7_EtOH GSE136673.ESR1.MCF-7_EtOH 73 bp overlap
ChIP MCF-7_EtOH_KO GSE136673.ESR1.MCF-7_EtOH_KO 58 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 138 bp overlap
ChIP MCF-7_OBHS GSE133941.ESR1.MCF-7_OBHS 138 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 81 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 138 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 112 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 82 bp overlap
ChIP MCF-7_Tamoxifen GSE102410.ESR1.MCF-7_Tamoxifen 138 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 138 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 71 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 102 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 98 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 138 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 138 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 125 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 97 bp overlap
EZH2 4 datasets
ChIP A673 ENCFF790MVL 54 bp overlap
ChIP H1 ENCFF232NZA 62 bp overlap
ChIP neural progenitor cell ENCFF472NFV 138 bp overlap
ChIP neural progenitor cell ENCFF472NFV 138 bp overlap
FOSL2 1 dataset
ChIP MCF-7 ENCSR546KCN.FOSL2.MCF-7 138 bp overlap
FOXA1 22 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 78 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 68 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 100 bp overlap
ChIP MCF-7_DSG GSE114737.FOXA1.MCF-7_DSG 138 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 138 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 58 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 67 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 58 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 136 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 60 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 76 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 126 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 138 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 138 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 138 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 138 bp overlap
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 138 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 138 bp overlap
ChIP breast_tumor_Female_3 GSE104399.FOXA1.breast_tumor_Female_3 138 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 138 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 138 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 138 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 138 bp overlap
ChIP DE DE-FOXA2-1 138 bp overlap
ChIP DE DE-FOXA2-2 57 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 51 bp overlap
GATA3 9 datasets
ChIP MCF-7 ENCFF352QVM 138 bp overlap
ChIP MCF-7 ENCFF695MAU 138 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 138 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 138 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 138 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 57 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 138 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 138 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 138 bp overlap
GRHL2 5 datasets
ChIP HBE GSE46194.GRHL2.HBE 108 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 138 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 138 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 138 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 138 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 50 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 138 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 138 bp overlap
ChIP GM12878 ENCFF918AID 138 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 138 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 130 bp overlap
JUN 1 dataset
ChIP MCF-7_TamR_BD610326 GSE128445.JUN.MCF-7_TamR_BD610326 71 bp overlap
MAX 1 dataset
ChIP HCT116 ENCFF810LEN 128 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 138 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 138 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 72 bp overlap
MYCN 1 dataset
ChIP 22Rv1_intact GSE117304.MYCN.22Rv1_intact 138 bp overlap
NR3C1 1 dataset
ChIP MCF-7 GSE152203.NR3C1.MCF-7 135 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 126 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 138 bp overlap
ChIP HCT-116_MLL4-SET-KO_ab834 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab834 138 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 138 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 138 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 94 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 71 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 138 bp overlap
RELA 1 dataset
ChIP MCF-7_TNFa_45m GSE67295.RELA.MCF-7_TNFa_45m 138 bp overlap
RFX1 2 datasets
ChIP MCF-7 ENCFF782EZS 138 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 138 bp overlap
RNF2 1 dataset
ChIP A-549 ENCSR798EGJ.RNF2.A-549 138 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 137 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 108 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 138 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 138 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 138 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 138 bp overlap
SMARCB1 3 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 138 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 138 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 138 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 138 bp overlap
STAT3 5 datasets
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 138 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 138 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 138 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 138 bp overlap
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 138 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 71 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 94 bp overlap
TEAD4 2 datasets
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 70 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 138 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCFF596XRL 78 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 65 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 117 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 136 bp overlap
ZEB1 1 dataset
ChIP RKO GSE88734.ZEB1.RKO 138 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 55 bp overlap
ZFX 1 dataset
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 93 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF299BWK 138 bp overlap
ZNF671 1 dataset
ChIP HEK293T GSE78099.ZNF671.HEK293T 138 bp overlap