chr8 : 59,040,711 – 59,040,998
287 bp 66 TFs 0 linked genes
This 287 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:59,035,711 – 59,045,998
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 2 datasets
ChIP 22Rv1 GSE85558.AR.22Rv1 106 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 194 bp overlap
ARNTL 2 datasets
ChIP U2OS GSE44236.ARNTL.U2OS 116 bp overlap
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 159 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 168 bp overlap
BACH2 2 datasets
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 130 bp overlap
ChIP DOHH2 GSE69558.BACH2.DOHH2 90 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 287 bp overlap
ChIP OCI-Ly1 GSE107920.BCL6.OCI-Ly1 50 bp overlap
CDX2 3 datasets
ChIP LS180 GSE31939.CDX2.LS180 73 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 149 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 287 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 129 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 131 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 287 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 81 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 287 bp overlap
ChIP breast_tumor_Male_16 GSE104399.ESR1.breast_tumor_Male_16 190 bp overlap
EZH2 2 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 223 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 237 bp overlap
FOXA1 2 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 94 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 110 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 137 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_16 GSE104399.GATA3.breast_tumor_Male_16 259 bp overlap
GFI1 2 datasets
ChIP NB4 GSE128528.GFI1.NB4 220 bp overlap
ChIP THP-1 GSE90769.GFI1.THP-1 183 bp overlap
HNF4A 9 datasets
ChIP GP5D GSE51234.HNF4A.GP5D 287 bp overlap
ChIP HCCLM3_Low-Glucose GSE101553.HNF4A.HCCLM3_Low-Glucose 89 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 287 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 64 bp overlap
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 189 bp overlap
ChIP liver ENCFF354NRH 98 bp overlap
ChIP liver ENCFF354NRH 69 bp overlap
ChIP liver ENCFF449HPV 128 bp overlap
ChIP liver ERP002306.HNF4A.liver 287 bp overlap
HNF4G 1 dataset
ChIP liver ENCFF170YNZ 186 bp overlap
JUND 4 datasets
ChIP GP5D GSE51234.JUND.GP5D 287 bp overlap
ChIP liver ENCFF007WWT 213 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 287 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 86 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 287 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 287 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 166 bp overlap
MAFK 1 dataset
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 65 bp overlap
MAX 2 datasets
ChIP liver ENCFF092GVW 181 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 78 bp overlap
NCOR1 2 datasets
ChIP LS180_125 GSE39277.NCOR1.LS180_125 125 bp overlap
ChIP OCI-Ly1 GSE29282.NCOR1.OCI-Ly1 101 bp overlap
NCOR2 1 dataset
ChIP OCI-Ly1 GSE29282.NCOR2.OCI-Ly1 115 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 73 bp overlap
ChIP K562 ENCFF047YKA 139 bp overlap
NIPBL 2 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 115 bp overlap
ChIP GP5D GSE51234.NIPBL.GP5D 121 bp overlap
NR2F2 1 dataset
ChIP liver ENCFF565JGD 163 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 144 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 55 bp overlap
POLR2A 4 datasets
ChIP PFSK-1 ENCFF576NIT 80 bp overlap
ChIP Peyer's patch ENCFF767HVN 287 bp overlap
ChIP Peyer's patch ENCFF767HVN 149 bp overlap
ChIP transverse colon ENCFF607LKE 205 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 50 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 219 bp overlap
Plagl1 2 datasets
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
Motif DE_24h DE_24h-Plagl1_MA1615.2 8 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 206 bp overlap
REST 4 datasets
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 95 bp overlap
ChIP liver ENCFF240FWT 287 bp overlap
ChIP liver ENCFF240FWT 107 bp overlap
ChIP liver ENCSR867WPH.REST.liver 84 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 173 bp overlap
ChIP liver ENCFF807CIA 243 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 90 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 90 bp overlap
SIN3A 1 dataset
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 103 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 146 bp overlap
SMARCA4 1 dataset
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 69 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 268 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 216 bp overlap
ChIP liver ENCFF597LFJ 141 bp overlap
SP2 2 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
SP3 2 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
TAF1 2 datasets
ChIP PFSK-1 ENCFF982LZL 239 bp overlap
ChIP PFSK1 ENCSR000BQN.TAF1.PFSK1 107 bp overlap
TCF7L2 1 dataset
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 93 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF582MWI 280 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 154 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 103 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 172 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 80 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 87 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 172 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 81 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 2 datasets
ChIP liver ENCFF400MBC 287 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 72 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 64 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 79 bp overlap
ZNF768 2 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif DE_24h DE_24h-ZNF768_MA1731.2 9 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 171 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 147 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 165 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 157 bp overlap
Huangfu Lab · Publications · Resources · Contact