chr7 : 102,934,772 102,934,981
209 bp 117 TFs 2 linked genes
This 209 bp open chromatin element is linked to FBXL13 and LRRC17 and is bound by 117 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
FBXL13 1.0 kb Proximal Proximity
LRRC17 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:102,929,772 – 102,939,981
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
117 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
ARGFX 1 dataset
Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 176 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
CDX1 1 dataset
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 209 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 209 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 135 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 206 bp overlap
CREB1 8 datasets
ChIP GM23338 ENCFF432ZEW 201 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 184 bp overlap
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 110 bp overlap
ChIP MCF-7 ENCFF341ZEM 209 bp overlap
ChIP MCF-7 ENCFF867SAS 209 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 149 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 132 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 67 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 199 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
CTNNB1 1 dataset
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 208 bp overlap
DRGX 1 dataset
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EMX1 1 dataset
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 209 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 209 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 134 bp overlap
ChIP hESC GSE17917.EP300.hESC 182 bp overlap
ESX1 1 dataset
Motif DE_12h DE_12h-ESX1_MA0644.3 7 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 209 bp overlap
EVX1 1 dataset
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 209 bp overlap
ChIP DE DE-FOXA2-2 209 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 141 bp overlap
ChIP DE DE-GATA6-2 113 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 180 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 130 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 197 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 169 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 116 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 202 bp overlap
GSX1 1 dataset
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
HOXA1 1 dataset
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
HOXA10 1 dataset
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
HOXA2 1 dataset
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
HOXD9 1 dataset
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
ISX 1 dataset
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 209 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 209 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 209 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 198 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 209 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 209 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 209 bp overlap
LHX5 1 dataset
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
LMX1A 1 dataset
Motif DE_12h DE_12h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_12h DE_12h-LMX1B_MA0703.3 8 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Lhx1 1 dataset
Motif DE_12h DE_12h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 118 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 209 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MEOX1 1 dataset
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 162 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Msgn1 1 dataset
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 209 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 202 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 209 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 209 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 209 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 209 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 209 bp overlap
ChIP hESC GSE18292.NANOG.hESC 184 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 184 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 209 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 209 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 162 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 1 dataset
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_12h DE_12h-NOTO_MA0710.2 7 bp overlap
PDX1 1 dataset
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 209 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 209 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
PRRX1 1 dataset
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 145 bp overlap
RAX2 1 dataset
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 154 bp overlap
SHOX 1 dataset
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 209 bp overlap
ChIP H1 ENCFF896IJG 209 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 187 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 162 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 180 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 209 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 209 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 209 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 209 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 209 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 209 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 209 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 164 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 209 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 135 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 209 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 209 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 209 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 209 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 168 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 209 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 53 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 57 bp overlap
Shox2 1 dataset
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
TCF7L2 1 dataset
ChIP hepatocellular-carcinoma-cell_420 GSE138781.TCF7L2.hepatocellular-carcinoma-cell_420 139 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 209 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 209 bp overlap
ChIP H1 ENCFF778PAX 156 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
TLX2 1 dataset
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_12h DE_12h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_12h DE_12h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_12h DE_12h-VSX2_MA0726.2 7 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 209 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 202 bp overlap
ZBTB32 1 dataset
Motif DE_12h DE_12h-ZBTB32_MA1580.1 10 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 160 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 209 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ChIP HEK293 GSE76494.ZNF528.HEK293 209 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
mix-a 1 dataset
Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap