chr1 : 148,522,155 – 148,522,409
254 bp 67 TFs 1 linked gene
This 254 bp open chromatin element is linked to RNVU1-27 and is bound by 67 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RNVU1-27 190 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:148,517,155 – 148,527,409
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
ATF1 3 datasets
ChIP K562 ENCFF469GPI 254 bp overlap
ChIP K562 ENCFF817JQF 254 bp overlap
ChIP K562 ENCFF817JQF 107 bp overlap
ATF2 2 datasets
ChIP HEK293 ENCFF194VKZ 254 bp overlap
ChIP K562 ENCFF139ZZG 237 bp overlap
ATF7 1 dataset
ChIP MCF-7 ENCFF578WKB 254 bp overlap
CREB1 16 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 222 bp overlap
ChIP GM12878 ENCFF870CVH 247 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 156 bp overlap
ChIP GM23338 ENCFF432ZEW 230 bp overlap
ChIP H1 ENCFF955PMP 130 bp overlap
ChIP HepG2 ENCFF576ERP 254 bp overlap
ChIP HepG2 ENCFF792THT 181 bp overlap
ChIP K-562 ENCSR000BSO.CREB1.K-562 186 bp overlap
ChIP K562 ENCFF786DGQ 180 bp overlap
ChIP LNCaP GSE63034.CREB1.LNCaP 184 bp overlap
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 181 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 248 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 166 bp overlap
ChIP MCF-7 ENCFF341ZEM 254 bp overlap
ChIP MCF-7 ENCFF867SAS 254 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 159 bp overlap
CREB3 1 dataset
ChIP K562 ENCFF985QJI 223 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 147 bp overlap
ChIP K562 ENCFF180STA 254 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 192 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCFF969VBY 142 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 171 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCFF712EXQ 148 bp overlap
E2F1 3 datasets
ChIP K562 ENCFF191BFW 254 bp overlap
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 168 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 160 bp overlap
EHMT2 2 datasets
ChIP A549 ENCFF026GWM 240 bp overlap
ChIP K562 ENCFF053BWO 154 bp overlap
ELF1 9 datasets
ChIP A-549 GSE122203.ELF1.A-549 110 bp overlap
ChIP GM12878 ENCFF692SMY 254 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 231 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 213 bp overlap
ChIP K562 ENCFF457KVR 213 bp overlap
ChIP K562 ENCFF496AKI 220 bp overlap
ChIP MCF-7 ENCFF305BNP 250 bp overlap
ChIP MCF-7 ENCFF687CWI 254 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 197 bp overlap
ELF4 2 datasets
ChIP K562 ENCFF200OMJ 200 bp overlap
ChIP K562 ENCFF454SBL 132 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 56 bp overlap
ESR1 1 dataset
ChIP MCF-7 ENCFF004AKH 178 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 247 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCFF528YED 206 bp overlap
GABPA 17 datasets
ChIP A-549 ENCSR000BPY.GABPA.A-549 150 bp overlap
ChIP GM12878 ENCFF872TWR 161 bp overlap
ChIP GM12878 ENCSR000BGC.GABPA.GM12878 106 bp overlap
ChIP Hep-G2 ENCSR000BJK.GABPA.Hep-G2 94 bp overlap
ChIP HepG2 ENCFF180FFY 254 bp overlap
ChIP HepG2 ENCFF467OEO 254 bp overlap
ChIP K-562 ENCSR000BLO.GABPA.K-562 239 bp overlap
ChIP K562 ENCFF139LXS 254 bp overlap
ChIP K562 ENCFF996TSW 170 bp overlap
ChIP MCF-7 ENCFF735CHO 254 bp overlap
ChIP MCF-7 ENCSR000BUK.GABPA.MCF-7 213 bp overlap
ChIP SK-N-SH ENCFF755TJJ 175 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 223 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 233 bp overlap
ChIP liver ENCFF027VSJ 227 bp overlap
ChIP liver ENCFF500III 254 bp overlap
ChIP liver ENCSR038GMB.GABPA.liver 254 bp overlap
GABPB1 3 datasets
ChIP HepG2 ENCFF315AWN 254 bp overlap
ChIP K562 ENCFF015GDS 254 bp overlap
ChIP K562 ENCFF885NMS 243 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCFF446EIF 142 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF940JZP 254 bp overlap
HOXA3 1 dataset
ChIP HepG2 ENCFF374TCI 254 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 160 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 146 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 148 bp overlap
MEIS2 1 dataset
ChIP K562 ENCFF320GSD 254 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 254 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF568JLK 170 bp overlap
PKNOX1 2 datasets
ChIP K562 ENCFF236IUS 143 bp overlap
ChIP MCF-7 ENCFF116OCS 234 bp overlap
POLR2A 13 datasets
ChIP A549 ENCFF748RAW 216 bp overlap
ChIP K562 ENCFF836GHX 53 bp overlap
ChIP MCF-7 ENCFF309IKZ 167 bp overlap
ChIP breast epithelium ENCFF955FMX 140 bp overlap
ChIP endothelial cell of umbilical vein ENCFF131DWO 147 bp overlap
ChIP lower leg skin ENCFF058ULB 168 bp overlap
ChIP prostate gland ENCFF832RQK 177 bp overlap
ChIP prostate gland ENCFF882MXU 182 bp overlap
ChIP sigmoid colon ENCFF101ILL 195 bp overlap
ChIP spleen ENCFF446ZGT 254 bp overlap
ChIP spleen ENCFF706IUS 254 bp overlap
ChIP vagina ENCFF216BYP 196 bp overlap
ChIP vagina ENCFF384GAB 254 bp overlap
POU2F1 4 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 139 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 142 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 144 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 254 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 165 bp overlap
ChIP HCT116 ENCFF568PEO 233 bp overlap
RBFOX2 4 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 254 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 254 bp overlap
ChIP K562 ENCFF196WTG 78 bp overlap
ChIP K562 ENCFF967GRF 254 bp overlap
SETDB1 1 dataset
ChIP K-562 ENCSR000EWI.SETDB1.K-562 58 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 236 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 149 bp overlap
SNAPC2 1 dataset
ChIP HepG2 ENCFF237IWR 254 bp overlap
SNAPC4 1 dataset
ChIP HepG2 ENCFF536CFY 201 bp overlap
SP2 1 dataset
ChIP HEK293 ENCFF181QXT 254 bp overlap
SP4 1 dataset
ChIP HepG2 ENCFF865DSQ 101 bp overlap
SPI1 4 datasets
ChIP HL-60 ENCFF645GBT 254 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 101 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 144 bp overlap
SREBF1 1 dataset
ChIP MCF-7 ENCFF254QOR 207 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 166 bp overlap
STAG1 3 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 133 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 163 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 136 bp overlap
SUZ12 1 dataset
ChIP MCF-7 ENCFF739TYI 136 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TAF7 2 datasets
ChIP K-562 ENCSR000BNM.TAF7.K-562 97 bp overlap
ChIP K562 ENCFF461SFY 222 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF794ZXJ 127 bp overlap
THAP1 3 datasets
ChIP K-562 ENCSR000BNN.THAP1.K-562 164 bp overlap
ChIP K562 ENCFF851EDE 254 bp overlap
ChIP K562 ENCFF851EDE 51 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 64 bp overlap
YY1 3 datasets
ChIP GM12878 ENCFF908JTL 120 bp overlap
ChIP K562 ENCFF199FNC 232 bp overlap
ChIP K562 ENCFF660QRE 79 bp overlap
ZBTB11 1 dataset
ChIP HEK293 ENCFF262GZJ 254 bp overlap
ZBTB12 1 dataset
ChIP K562 ENCFF933CVM 254 bp overlap
ZBTB21 1 dataset
ChIP HEK293 ENCFF509WYZ 254 bp overlap
ZBTB40 3 datasets
ChIP GM12878 ENCFF346DYM 208 bp overlap
ChIP K562 ENCFF521DSV 254 bp overlap
ChIP MCF-7 ENCFF044DWL 240 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 254 bp overlap
ZC3H8 2 datasets
ChIP K562 ENCFF462ENR 182 bp overlap
ChIP K562 ENCFF495URH 143 bp overlap
ZNF143 5 datasets
ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 127 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 133 bp overlap
ChIP K562 ENCFF554TVF 254 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 240 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 232 bp overlap
ZNF217 2 datasets
ChIP MCF-7 ENCFF379OSU 146 bp overlap
ChIP MCF-7 ENCFF379OSU 254 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCFF944VMC 254 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 254 bp overlap
ZNF398 1 dataset
ChIP HEK293 ENCFF184XEW 243 bp overlap
ZNF518A 1 dataset
ChIP HEK293 ENCFF892ULS 197 bp overlap
ZNF584 2 datasets
ChIP K562 ENCFF771INO 254 bp overlap
ChIP K562 ENCFF771INO 68 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCFF096ELQ 254 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 254 bp overlap
ChIP MCF-7 ENCFF440BFX 166 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCFF374TCG 93 bp overlap
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