chr6 : 10,309,934 10,310,315
381 bp 100 TFs 0 linked genes
This 381 bp open chromatin element has no linked target genes and is bound by 100 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:10,304,934 – 10,315,315
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 243 bp overlap
AR 1 dataset
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 122 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 376 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 240 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 233 bp overlap
BCL11A 2 datasets
ChIP HEK293 ENCFF294OHB 218 bp overlap
ChIP HEK293 ENCSR021DJC.BCL11A.HEK293 146 bp overlap
BRCA1 1 dataset
ChIP HeLa-S3 ENCFF218GPC 53 bp overlap
BRD4 11 datasets
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 304 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 369 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 381 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 112 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 313 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 181 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 377 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 313 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 362 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 278 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 283 bp overlap
CDK9 3 datasets
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 173 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 167 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 181 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 192 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 280 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 191 bp overlap
ELK4 1 dataset
ChIP HeLa-S3 ENCSR000EVI.ELK4.HeLa-S3 318 bp overlap
EP300 4 datasets
ChIP HeLa-S3 ENCFF245KNK 75 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 158 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 130 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 121 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 176 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 238 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
FEZF1 4 datasets
ChIP HEK293 ENCFF528YED 328 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 194 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 381 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 110 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 175 bp overlap
FOS 1 dataset
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 121 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 100 bp overlap
FOXA1 6 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 177 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 328 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 293 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 321 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 182 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 129 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 373 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 381 bp overlap
GFI1B 1 dataset
ChIP HEK293 ENCFF264FBS 234 bp overlap
GTF2F1 2 datasets
ChIP HeLa-S3 ENCFF868VGE 136 bp overlap
ChIP HeLa-S3 ENCFF868VGE 337 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 381 bp overlap
HMBOX1 1 dataset
ChIP HeLa GSE46237.HMBOX1.HeLa 238 bp overlap
HOXB13 2 datasets
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 83 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 267 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 185 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 346 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 381 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUN 1 dataset
ChIP HeLa-S3 ENCFF668QVP 51 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCFF642OHL 50 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 125 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 195 bp overlap
MED1 3 datasets
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 199 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 295 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 350 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
NANOG 7 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 342 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 181 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 143 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 279 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 224 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 213 bp overlap
ChIP hESC GSE18292.NANOG.hESC 125 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 292 bp overlap
OVOL3 1 dataset
ChIP HEK293 ENCFF898STB 332 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 91 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 381 bp overlap
POU5F1 3 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 125 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 263 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 381 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 381 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 216 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 202 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 381 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 357 bp overlap
SMARCA2 3 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 311 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 365 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 236 bp overlap
SMARCA4 6 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 125 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 381 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 322 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 138 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 279 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 290 bp overlap
SMARCC1 2 datasets
ChIP HeLa-S3 ENCFF971JGA 381 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 253 bp overlap
SMC3 4 datasets
ChIP GP5D GSE51234.SMC3.GP5D 267 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 381 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 381 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 381 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 202 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 210 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 184 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 245 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 174 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
TBP 3 datasets
ChIP HeLa-S3 ENCFF715NNJ 93 bp overlap
ChIP HeLa-S3 ENCFF715NNJ 111 bp overlap
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 104 bp overlap
TCF7L2 4 datasets
ChIP HEK293 ENCFF513JQN 381 bp overlap
ChIP HeLa-S3 ENCFF673QAB 273 bp overlap
ChIP HeLa-S3 ENCFF673QAB 73 bp overlap
ChIP HeLa-S3 ENCSR000EVE.TCF7L2.HeLa-S3 125 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 381 bp overlap
ChIP HEK293 ENCFF582MWI 232 bp overlap
UBN1 1 dataset
ChIP HeLa GSE45024.UBN1.HeLa 85 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 112 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 348 bp overlap
ZBTB1 1 dataset
ChIP HEK293 ENCFF916DEM 137 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 285 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 162 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 381 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 157 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 152 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 128 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 122 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCFF066RAQ 381 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 381 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 312 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 322 bp overlap
ZSCAN16 2 datasets
ChIP HEK293 ENCFF533NFT 259 bp overlap
ChIP HEK293 ENCFF533NFT 263 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCFF082YBI 220 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 212 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 215 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap