chr5 : 135,027,861 135,028,205
344 bp 79 TFs 3 linked genes
This 344 bp open chromatin element is linked to PITX1, PITX1-AS1, and ENSG00000277619 and is bound by 79 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
PITX1 4.9 kb Proximal Proximity
PITX1-AS1 5.2 kb Proximal Proximity
ENSG00000277619 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:135,022,861 – 135,033,205
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
AGO1 3 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 119 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 276 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 264 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 344 bp overlap
ChIP HepG2 ENCFF773YDL 344 bp overlap
AR 4 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 202 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.AR.breast-cancer_Veh-2858 96 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 152 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 216 bp overlap
ASH2L 2 datasets
ChIP WA01 ENCSR850KIP.ASH2L.WA01 160 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 146 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 105 bp overlap
BRD3 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 102 bp overlap
BRD4 4 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 322 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 344 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 246 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 294 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 64 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 173 bp overlap
CBX7 2 datasets
ChIP hESC GSE133412.CBX7.hESC 186 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 187 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 344 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 62 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 50 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 234 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 215 bp overlap
CTCF 1 dataset
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 344 bp overlap
DDX5 1 dataset
ChIP BT-549 GSE112961.DDX5.BT-549 342 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 130 bp overlap
EED 2 datasets
ChIP ProEs GSE59087.EED.ProEs 146 bp overlap
ChIP ProEs GSE59087.EED.ProEs 51 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 258 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 154 bp overlap
ESR1 5 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 159 bp overlap
ChIP Ishikawa GSE99905.ESR1.Ishikawa 76 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 65 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 240 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 310 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 117 bp overlap
EZH2 27 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 151 bp overlap
ChIP B cell ENCFF803EMO 339 bp overlap
ChIP B cell ENCFF803EMO 204 bp overlap
ChIP GM23248 ENCFF404ZHM 98 bp overlap
ChIP GM23248 ENCFF404ZHM 313 bp overlap
ChIP GM23248 ENCFF404ZHM 169 bp overlap
ChIP GM23338 ENCFF613YON 344 bp overlap
ChIP GM23338 ENCFF886DXX 344 bp overlap
ChIP H1 ENCFF232NZA 344 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 344 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 253 bp overlap
ChIP astrocyte ENCFF365JTP 344 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 344 bp overlap
ChIP fibroblast of lung ENCFF479BAW 344 bp overlap
ChIP fibroblast of lung ENCFF479BAW 342 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 221 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 97 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 75 bp overlap
ChIP hepatocyte ENCFF118DKH 253 bp overlap
ChIP hepatocyte ENCFF552DZB 296 bp overlap
ChIP hepatocyte ENCFF552DZB 141 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.EZH2.hiPSC_WTa_RNase-neg 314 bp overlap
ChIP keratinocyte ENCFF070STK 344 bp overlap
ChIP neural cell ENCFF610EPB 192 bp overlap
ChIP neural progenitor cell ENCFF018MKA 344 bp overlap
ChIP neural progenitor cell ENCFF472NFV 344 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 344 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 344 bp overlap
FOXF1 1 dataset
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 98 bp overlap
GABPA 2 datasets
ChIP WA01 ENCSR000BIW.GABPA.WA01 77 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 76 bp overlap
HEXIM1 2 datasets
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 235 bp overlap
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 54 bp overlap
HIVEP1 2 datasets
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 105 bp overlap
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 119 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 186 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 186 bp overlap
HNRNPL 2 datasets
ChIP K-562 ENCSR594BNR.HNRNPL.K-562 102 bp overlap
ChIP K562 ENCFF296JLL 246 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 122 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 188 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 98 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 112 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 57 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 82 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 221 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 226 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 331 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 303 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 303 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 344 bp overlap
NCAPH2 4 datasets
ChIP HEK293 GSE97540.NCAPH2.HEK293 142 bp overlap
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 58 bp overlap
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 81 bp overlap
ChIP IMR-90_FLAG_G GSE118494.NCAPH2.IMR-90_FLAG_G 149 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 204 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 73 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 344 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 344 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 283 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 320 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 344 bp overlap
PCBP1 3 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 183 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 315 bp overlap
ChIP K-562 ENCSR052PTN.PCBP1.K-562 84 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF384GAB 344 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 344 bp overlap
ChIP K562 ENCFF648YPL 344 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 344 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 344 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 81 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 344 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 291 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 344 bp overlap
PRPF4 6 datasets
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 185 bp overlap
ChIP K-562 GSE120104.PRPF4.K-562 344 bp overlap
ChIP K-562 ENCSR220YXI.PRPF4.K-562 284 bp overlap
ChIP K562 ENCFF046WLD 344 bp overlap
ChIP K562 ENCFF046WLD 276 bp overlap
ChIP K562 ENCFF202AJJ 344 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 150 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 344 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 344 bp overlap
ChIP HepG2 ENCFF939HTZ 344 bp overlap
ChIP K562 ENCFF196WTG 344 bp overlap
ChIP K562 ENCFF967GRF 344 bp overlap
RBM14 1 dataset
ChIP K-562 ENCSR423FCW.RBM14.K-562 223 bp overlap
RBM22 2 datasets
ChIP K562 ENCFF629OUL 199 bp overlap
ChIP K562 ENCFF629OUL 271 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 344 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 234 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 50 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 164 bp overlap
SMARCA4 1 dataset
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 171 bp overlap
SREBP2 1 dataset
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 344 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 344 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 72 bp overlap
ChIP K562 ENCFF902PAW 242 bp overlap
SUZ12 8 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 344 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 175 bp overlap
ChIP NT2/D1 ENCFF574SXS 344 bp overlap
ChIP NT2/D1 ENCFF574SXS 344 bp overlap
ChIP ProEs GSE59087.SUZ12.ProEs 52 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 344 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.SUZ12.hiPSC_WTb_RNase-neg 218 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 312 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 344 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 344 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 269 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 142 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 344 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 344 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 248 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 213 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 158 bp overlap