chr5 : 94,174,911 – 94,175,336
425 bp 54 TFs 0 linked genes
This 425 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:94,169,911 – 94,180,336
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 425 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 214 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 139 bp overlap
BRD2 1 dataset
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 396 bp overlap
BRD4 10 datasets
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 178 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 183 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 183 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 179 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 191 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 343 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 343 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 179 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 332 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 332 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 134 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 110 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 105 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 351 bp overlap
DAXX 2 datasets
ChIP PC-3 GSE68647.DAXX.PC-3 162 bp overlap
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 89 bp overlap
EBF3_P177L 1 dataset
ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 223 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 204 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCFF451CNG 220 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 182 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 334 bp overlap
FOS 2 datasets
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 91 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 160 bp overlap
FOSL1 1 dataset
ChIP MDA-MB-231 GSE95303.FOSL1.MDA-MB-231 90 bp overlap
FOSL2 3 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 152 bp overlap
ChIP SK-N-SH ENCFF127ZDW 156 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 136 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 58 bp overlap
ChIP DE DE-FOXA2-1 249 bp overlap
ChIP DE DE-FOXA2-2 242 bp overlap
FOXL2 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 356 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 339 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 176 bp overlap
GATA2 2 datasets
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 175 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 143 bp overlap
GATA3 3 datasets
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 312 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 144 bp overlap
ChIP SK-N-SH ENCFF040SSB 126 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 128 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 179 bp overlap
ChIP DE DE-GATA4-1 246 bp overlap
ChIP DE DE-GATA4-2 325 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 425 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 235 bp overlap
ChIP DE DE-GATA6-2 238 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 352 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 411 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 331 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 425 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 425 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 368 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 279 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 324 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 324 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 413 bp overlap
ChIP SK-N-SH ENCFF285GEQ 173 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 369 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 425 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 308 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 324 bp overlap
JUND 4 datasets
ChIP SK-N-SH ENCFF551NEQ 167 bp overlap
ChIP SK-N-SH ENCFF971JKN 183 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 170 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 122 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 304 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 175 bp overlap
MED1 2 datasets
ChIP U-87MG GSE36354.MED1.U-87MG 147 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 251 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 180 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 410 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 99 bp overlap
NR2F2 1 dataset
ChIP WI-38VA13 GSE46237.NR2F2.WI-38VA13 108 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 258 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 301 bp overlap
ONECUT2 1 dataset
ChIP PC-3_hypoxia GSE106305.ONECUT2.PC-3_hypoxia 93 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 167 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 345 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 204 bp overlap
POU5F1 2 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 252 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 65 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 350 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 293 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 96 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
RNF2 1 dataset
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 163 bp overlap
RXRA 2 datasets
ChIP SK-N-SH ENCFF893DLM 211 bp overlap
ChIP SK-N-SH ENCSR000BVG.RXRA.SK-N-SH 125 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 353 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 377 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 279 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 385 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 279 bp overlap
SMARCA4 7 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 133 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 103 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 96 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 86 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 91 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 73 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 196 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 203 bp overlap
STAT3 1 dataset
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 160 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 238 bp overlap
TCF12 2 datasets
ChIP SK-N-SH ENCFF147AHB 268 bp overlap
ChIP SK-N-SH ENCFF147AHB 347 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 241 bp overlap
TEAD4 5 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 261 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 159 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 261 bp overlap
ChIP SK-N-SH ENCFF754TJT 242 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 122 bp overlap
TP53 2 datasets
ChIP A-498_2h_4GY GSE100292.TP53.A-498_2h_4GY 227 bp overlap
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 146 bp overlap
YAP1 1 dataset
ChIP MDA-MB-231 GSE66081.YAP1.MDA-MB-231 210 bp overlap
YY1 1 dataset
ChIP SK-N-SH ENCFF087JSD 417 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 295 bp overlap
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