chr5 : 36,274,344 – 36,274,862

518 bp 116 TFs 0 linked genes

This 518 bp open chromatin element has no linked target genes and is bound by 116 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

116 transcription factors

ALX3 1 dataset

Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap

ARGFX 1 dataset

Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap

ATF4 1 dataset

Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap

Alx1 1 dataset

Motif DE_12h DE_12h-Alx1_MA0854.2 8 bp overlap

Alx4 1 dataset

Motif DE_12h DE_12h-Alx4_MA0853.2 12 bp overlap

Arx 1 dataset

Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap

BRD4 1 dataset

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 154 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 108 bp overlap

CEBPA 12 datasets

ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 54 bp overlap

ChIP T-47D GSE132649.CEBPA.T-47D 105 bp overlap

ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 134 bp overlap

ChIP T-47D_siCEBPA GSE132649.CEBPA.T-47D_siCEBPA 69 bp overlap

ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 130 bp overlap

ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 130 bp overlap

ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 66 bp overlap

ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 136 bp overlap

ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 171 bp overlap

ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 136 bp overlap

ChIP U-937 ERP008568.CEBPA.U-937 110 bp overlap

ChIP liver ERP002306.CEBPA.liver 54 bp overlap

CEBPB 11 datasets

ChIP A549 ENCFF235AIY 79 bp overlap

ChIP A549 ENCFF781RLJ 72 bp overlap

ChIP H1 ENCFF871PTR 85 bp overlap

ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 116 bp overlap

ChIP HeLa-S3 ENCFF722WEG 101 bp overlap

ChIP IMR-90 ENCFF468UGY 95 bp overlap

ChIP K562 ENCFF584CTB 229 bp overlap

ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 51 bp overlap

ChIP monocyte GSE98367.CEBPB.monocyte 61 bp overlap

ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 125 bp overlap

ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 69 bp overlap

CEBPG 3 datasets

ChIP K-562 ENCSR490LWA.CEBPG.K-562 68 bp overlap

ChIP K562 ENCFF783ADE 202 bp overlap

ChIP MCF-7 ENCFF155HZI 207 bp overlap

CRY1 1 dataset

ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 255 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 324 bp overlap

Cebpa 12 datasets

ChIP BLaER1 ENCFF093OYK 145 bp overlap

ChIP BLaER1 ENCFF234NTO 252 bp overlap

ChIP BLaER1 ENCFF234NTO 441 bp overlap

ChIP BLaER1 ENCFF250ODG 151 bp overlap

ChIP BLaER1 ENCFF274GAT 186 bp overlap

ChIP BLaER1 ENCFF335XTP 252 bp overlap

ChIP BLaER1 ENCFF346MCV 171 bp overlap

ChIP BLaER1 ENCFF374ODN 151 bp overlap

ChIP BLaER1 ENCFF798NMV 185 bp overlap

ChIP BLaER1 ENCFF844FIP 178 bp overlap

ChIP BLaER1 ENCFF858JKM 167 bp overlap

ChIP BLaER1 ENCFF896HSY 236 bp overlap

DMRTA2 1 dataset

Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap

DRGX 1 dataset

Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap

E2F7 1 dataset

Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap

EGR1 1 dataset

ChIP liver ENCFF130MBW 161 bp overlap

EMX1 1 dataset

Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap

EMX2 1 dataset

Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap

EN1 1 dataset

Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap

EN2 1 dataset

Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap

ESX1 1 dataset

Motif DE_12h DE_12h-ESX1_MA0644.3 7 bp overlap

ETV2 1 dataset

Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap

EVX1 1 dataset

Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap

EVX2 1 dataset

Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 260 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 311 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 259 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 292 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 374 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 341 bp overlap

GBX1 1 dataset

Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap

GSX1 1 dataset

Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap

GSX2 1 dataset

Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap

HNF4A 1 dataset

ChIP liver ENCFF354NRH 88 bp overlap

HNRNPK 3 datasets

ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 73 bp overlap

ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 73 bp overlap

ChIP K-562 GSE120104.HNRNPK.K-562 180 bp overlap

HOXA1 1 dataset

Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap

HOXA2 1 dataset

Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap

HOXA3 1 dataset

Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap

HOXB1 1 dataset

Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap

HOXB2 1 dataset

Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap

HOXB3 1 dataset

Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap

HOXB5 1 dataset

Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap

HOXC8 1 dataset

Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap

HOXD3 1 dataset

Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap

HSF2 1 dataset

Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

ISX 1 dataset

Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 299 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 230 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 307 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 106 bp overlap

LBX1 1 dataset

Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap

LHX5 1 dataset

Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap

LHX6 1 dataset

Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap

LHX9 1 dataset

Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap

LMX1A 1 dataset

Motif DE_12h DE_12h-LMX1A_MA0702.3 7 bp overlap

LMX1B 1 dataset

Motif DE_12h DE_12h-LMX1B_MA0703.3 8 bp overlap

Lef1 1 dataset

Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap

Lhx1 1 dataset

Motif DE_12h DE_12h-Lhx1_MA1518.3 10 bp overlap

Lhx4 1 dataset

Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap

Lhx8 1 dataset

Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap

MAX 1 dataset

ChIP liver ENCFF584QGB 138 bp overlap

MED1 3 datasets

ChIP SGBS GSE64233.MED1.SGBS 261 bp overlap

ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 186 bp overlap

ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 197 bp overlap

MEOX1 1 dataset

Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap

MEOX2 1 dataset

Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap

MIXL1 1 dataset

Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap

MNX1 1 dataset

Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap

NANOG 2 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 285 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 283 bp overlap

NKX6-1 1 dataset

Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap

NKX6-2 1 dataset

Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap

NOTO 1 dataset

Motif DE_12h DE_12h-NOTO_MA0710.2 7 bp overlap

PAX4 1 dataset

Motif DE_12h DE_12h-PAX4_MA0068.2 8 bp overlap

PDX1 1 dataset

Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap

PHOX2A 1 dataset

Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 149 bp overlap

POU5F1 4 datasets

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 325 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 325 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 361 bp overlap

POU6F1 1 dataset

Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap

POU6F2 1 dataset

Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap

PROP1 1 dataset

Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap

PRRX1 1 dataset

Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap

PRRX2 1 dataset

Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

RAX2 1 dataset

Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap

RXR 1 dataset

ChIP macrophage ERP008801.RXR.macrophage 136 bp overlap

RXRA 1 dataset

ChIP liver ENCFF807CIA 105 bp overlap

SHOX 1 dataset

Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 351 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 287 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 275 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 238 bp overlap

SMARCC1 1 dataset

ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 221 bp overlap

SP1 1 dataset

ChIP liver ENCFF597LFJ 92 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

STAT1 1 dataset

ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 127 bp overlap

Shox2 1 dataset

Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TLX2 1 dataset

Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap

UNCX 1 dataset

Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap

VAX1 1 dataset

Motif DE_12h DE_12h-VAX1_MA0722.2 7 bp overlap

VAX2 1 dataset

Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap

VDR 1 dataset

ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 205 bp overlap

VEZF1 1 dataset

Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap

VSX1 1 dataset

Motif DE_12h DE_12h-VSX1_MA0725.2 7 bp overlap

VSX2 1 dataset

Motif DE_12h DE_12h-VSX2_MA0726.2 7 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF148 1 dataset

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

ZNF214 1 dataset

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF320 1 dataset

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

ZNF652 1 dataset

Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap

ZNF675 1 dataset

Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap

ZNF770 1 dataset

Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap

mix-a 1 dataset

Motif DE_12h DE_12h-mix-a_MA0621.2 7 bp overlap