chr4 : 173,506,646 173,507,174
528 bp 66 TFs 1 linked gene
This 528 bp open chromatin element is linked to ENSG00000286039 and is bound by 66 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000286039 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:173,501,646 – 173,512,174
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 334 bp overlap
ARID2 2 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 327 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 358 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 502 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 528 bp overlap
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 104 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 177 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 221 bp overlap
BCOR 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 528 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 528 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 528 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 528 bp overlap
BRD4 8 datasets
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 208 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 502 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 528 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 528 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 177 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 342 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 301 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 285 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 352 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 326 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 139 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 450 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 269 bp overlap
CTCF 47 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 226 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 240 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 278 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 155 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 201 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 160 bp overlap
ChIP GM10248 ENCFF226VLZ 140 bp overlap
ChIP GM12872 ENCFF697BYI 210 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 239 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 300 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 150 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 233 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 263 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 176 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 347 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 260 bp overlap
ChIP SK-N-SH ENCFF731NJX 212 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 215 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 201 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 207 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 364 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 96 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 337 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 162 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 153 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 160 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 187 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 150 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 219 bp overlap
ChIP heart left ventricle ENCFF185CKY 287 bp overlap
ChIP heart left ventricle ENCFF354HOQ 131 bp overlap
ChIP heart left ventricle ENCFF548XHH 256 bp overlap
ChIP heart left ventricle ENCFF842XRG 251 bp overlap
ChIP heart right ventricle ENCFF027ORH 157 bp overlap
ChIP heart right ventricle ENCFF435TKW 167 bp overlap
ChIP heart right ventricle ENCFF577TID 135 bp overlap
ChIP heart right ventricle ENCFF725NNJ 375 bp overlap
ChIP heart right ventricle ENCFF979TCT 313 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 261 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 240 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 190 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 308 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 273 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 264 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 152 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 190 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 144 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 113 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 219 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 370 bp overlap
ELF1 4 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 222 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 205 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 185 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.ELF1.SK-N-MC_SHGFP_96H 142 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCFF829RWA 136 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 528 bp overlap
ChIP pulmonary-artery_endothelial-cell_siCtrl GSE89786.EP300.pulmonary-artery_endothelial-cell_siCtrl 381 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 493 bp overlap
ETS1 2 datasets
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 472 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 173 bp overlap
EZH2 20 datasets
ChIP B cell ENCFF803EMO 338 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 305 bp overlap
ChIP GM23338 ENCFF613YON 528 bp overlap
ChIP GM23338 ENCFF886DXX 191 bp overlap
ChIP H1 ENCFF232NZA 528 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 432 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 528 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 228 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 522 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 522 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 107 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 528 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 144 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 279 bp overlap
ChIP keratinocyte ENCFF070STK 467 bp overlap
ChIP keratinocyte ENCFF070STK 450 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 528 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 528 bp overlap
ChIP neural progenitor cell ENCFF018MKA 528 bp overlap
ChIP neural progenitor cell ENCFF472NFV 528 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 52 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 79 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 119 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 469 bp overlap
FOXA1 1 dataset
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 107 bp overlap
GATA2 3 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 328 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 114 bp overlap
ChIP SK-N-SH ENCFF764OZD 245 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 63 bp overlap
JARID2 6 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 525 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 528 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 528 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 472 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 528 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 528 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 418 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 291 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 213 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 486 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 430 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 457 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 199 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 322 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 422 bp overlap
POLR2A 2 datasets
ChIP GM12891 ENCFF012SUT 151 bp overlap
ChIP GM18951 ENCFF079KKO 355 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 209 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 275 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 375 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 332 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 253 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 528 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 226 bp overlap
RAD21 3 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 263 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 412 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 220 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 308 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 261 bp overlap
REST 2 datasets
ChIP SK-N-SH ENCFF861MKH 222 bp overlap
ChIP SK-N-SH ENCFF861MKH 225 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 528 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 528 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 517 bp overlap
RUNX1 1 dataset
ChIP AML GSE111821.RUNX1.AML 322 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 493 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 232 bp overlap
SIN3A 2 datasets
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 176 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 142 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 121 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 223 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 310 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 528 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 349 bp overlap
SMARCC1 5 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 528 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 79 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 361 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 424 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 519 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 528 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 291 bp overlap
SMC3 1 dataset
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 202 bp overlap
SPI1 4 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 162 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 86 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 111 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 89 bp overlap
SS18 4 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 196 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 528 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 528 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 180 bp overlap
STAG1 1 dataset
ChIP erythroid GSE67783.STAG1.erythroid 221 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 198 bp overlap
SUZ12 8 datasets
ChIP GM12878 ENCFF498QAM 240 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 237 bp overlap
ChIP H1 ENCFF507HGF 200 bp overlap
ChIP H1 ENCFF881NFR 528 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 479 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 228 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 502 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 209 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 117 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 153 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 177 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 280 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 153 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 424 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 322 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 416 bp overlap