chr4 : 25,368,152 25,368,608
456 bp 68 TFs 1 linked gene
This 456 bp open chromatin element is linked to ANAPC4 and is bound by 68 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ANAPC4 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:25,363,152 – 25,373,608
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AR 58 datasets
ChIP LNCaP GSE110655.AR.LNCaP 325 bp overlap
ChIP LNCaP GSE117430.AR.LNCaP 315 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 258 bp overlap
ChIP LNCaP GSE80256.AR.LNCaP 291 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 216 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 174 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 197 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 456 bp overlap
ChIP LNCaP_1F5 GSE30623.AR.LNCaP_1F5 131 bp overlap
ChIP LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h GSE89938.AR.LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h 182 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 281 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 185 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 274 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 172 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 291 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 331 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 176 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 255 bp overlap
ChIP LNCaP_SHCTR_R1881 GSE37345.AR.LNCaP_SHCTR_R1881 172 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 149 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 272 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 212 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 254 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 160 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 293 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 325 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 288 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 214 bp overlap
ChIP VCaP GSE148358.AR.VCaP 297 bp overlap
ChIP VCaP GSE28950.AR.VCaP 239 bp overlap
ChIP VCaP GSE32892.AR.VCaP 224 bp overlap
ChIP VCaP-LTAD_DHT_10nM GSE94577.AR.VCaP-LTAD_DHT_10nM 348 bp overlap
ChIP VCaP-LTAD_DHT_1nM GSE94577.AR.VCaP-LTAD_DHT_1nM 366 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 292 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 301 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 329 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 406 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 374 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 456 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 353 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 230 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 208 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 177 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 195 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 230 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 293 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 281 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 364 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 332 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 331 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 297 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 348 bp overlap
ChIP VCaP_Veh GSE125245.AR.VCaP_Veh 213 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 324 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 287 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 315 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 249 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 163 bp overlap
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 456 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 369 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 215 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 271 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 163 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 152 bp overlap
BRD4 5 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 172 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 225 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 82 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 151 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 258 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 168 bp overlap
CTCF 1 dataset
ChIP GM04648 GSE148179.CTCF.GM04648 151 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 95 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 230 bp overlap
ChIP HepG2 ENCFF354ACD 270 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 171 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 207 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 305 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 219 bp overlap
FOXA1 20 datasets
ChIP HepG2 ENCFF207NVJ 150 bp overlap
ChIP HepG2 ENCFF361KNY 285 bp overlap
ChIP HepG2 ENCFF740VZW 75 bp overlap
ChIP Huh-7_ASYNC GSE39241.FOXA1.Huh-7_ASYNC 173 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 240 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 192 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 231 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 251 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 289 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 190 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 166 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 249 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 304 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 456 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 287 bp overlap
ChIP liver ERP002306.FOXA1.liver 256 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 286 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 315 bp overlap
ChIP prostate_2030_T GSE130408.FOXA1.prostate_2030_T 199 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 282 bp overlap
FOXA2 7 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 248 bp overlap
ChIP DE DE-FOXA2-1 456 bp overlap
ChIP DE DE-FOXA2-2 456 bp overlap
ChIP HepG2 ENCFF533COJ 131 bp overlap
ChIP HepG2 ENCFF894AYY 235 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 305 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 323 bp overlap
FOXJ3 2 datasets
ChIP Hep-G2 ENCSR413AJG.FOXJ3.Hep-G2 260 bp overlap
ChIP HepG2 ENCFF430OSX 371 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 161 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 370 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 319 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 351 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 436 bp overlap
FOXO1 1 dataset
ChIP HepG2 ENCFF088FIR 325 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 146 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 190 bp overlap
FOXP1 2 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 240 bp overlap
ChIP HepG2 ENCFF823ERM 320 bp overlap
FOXP4 2 datasets
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 297 bp overlap
ChIP HepG2 ENCFF462ULY 353 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 252 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 154 bp overlap
GATA2 6 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 278 bp overlap
ChIP HepG2 ENCFF905PYM 334 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 206 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 194 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 180 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 214 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 246 bp overlap
ChIP DE DE-GATA4-1 456 bp overlap
ChIP DE DE-GATA4-2 456 bp overlap
ChIP Hep-G2 ENCSR590CNM.GATA4.Hep-G2 295 bp overlap
ChIP HepG2 ENCFF309FOQ 334 bp overlap
ChIP foregut GSE117136.GATA4.foregut 357 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 456 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 456 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 336 bp overlap
ChIP AGS GSE51936.GATA6.AGS 113 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 211 bp overlap
ChIP DE DE-GATA6-1 456 bp overlap
ChIP DE DE-GATA6-2 456 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 338 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 125 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 316 bp overlap
ChIP foregut GSE117136.GATA6.foregut 379 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 431 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 456 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 386 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 456 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 367 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 309 bp overlap
ChIP HepG2 ENCFF087XCR 337 bp overlap
HNF1A 1 dataset
ChIP HepG2 ENCFF540TRC 408 bp overlap
ISL2 2 datasets
ChIP Hep-G2 ENCSR492IHH.ISL2.Hep-G2 254 bp overlap
ChIP HepG2 ENCFF742RIP 390 bp overlap
LCOR 2 datasets
ChIP HepG2 ENCFF499KCU 340 bp overlap
ChIP HepG2 ENCFF499KCU 128 bp overlap
MAFF 2 datasets
ChIP HeLa-S3 ENCFF783SBT 51 bp overlap
ChIP K562 ENCFF071YKK 58 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 156 bp overlap
MAFK 1 dataset
ChIP K562 ENCFF380WHM 62 bp overlap
MED1 2 datasets
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 277 bp overlap
ChIP VCaP GSE148358.MED1.VCaP 413 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 234 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 223 bp overlap
NCOA2 1 dataset
ChIP HepG2 ENCFF853BJJ 386 bp overlap
NR2F2 4 datasets
ChIP liver ENCFF427MRU 290 bp overlap
ChIP liver ENCFF565JGD 334 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 207 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 191 bp overlap
NR2F6 1 dataset
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 217 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 181 bp overlap
ChIP HepG2 ENCFF526NOJ 456 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 233 bp overlap
PITX1 1 dataset
ChIP HepG2 ENCFF468QTQ 386 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 372 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 456 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 443 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 373 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 238 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 410 bp overlap
SMAD4 3 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 158 bp overlap
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 266 bp overlap
ChIP HepG2 ENCFF615GTE 337 bp overlap
SMARCC1 1 dataset
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 182 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 169 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 206 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 140 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 360 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 349 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 335 bp overlap
ChIP HepG2 ENCFF767OCK 456 bp overlap
TBX2 2 datasets
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 215 bp overlap
ChIP HepG2 ENCFF811TLA 446 bp overlap
TCF7L2 1 dataset
ChIP HepG2 ENCFF510OLG 372 bp overlap
TFAP4 2 datasets
ChIP DLD-1 GSE46935.TFAP4.DLD-1 297 bp overlap
ChIP HepG2 ENCFF932XOY 378 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 170 bp overlap
ZNF12 1 dataset
ChIP HepG2 ENCFF347LSW 293 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 391 bp overlap
ZNF239 2 datasets
ChIP K-562 ENCSR606KTL.ZNF239.K-562 206 bp overlap
ChIP K562 ENCFF703IKI 271 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 72 bp overlap