chr4 : 13,415,230 13,415,905
675 bp 76 TFs 0 linked genes
This 675 bp open chromatin element has no linked target genes and is bound by 76 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:13,410,230 – 13,420,905
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
ATF2 7 datasets
ChIP GM12878 ENCFF066HPG 56 bp overlap
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 92 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 96 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF955VER 103 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 118 bp overlap
ChIP K562 ENCFF139ZZG 87 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 129 bp overlap
ChIP K562 ENCFF604FPV 60 bp overlap
ATF7 3 datasets
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 97 bp overlap
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 116 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 116 bp overlap
BRD4 2 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 193 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 209 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 579 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF792THT 103 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 81 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 251 bp overlap
E2F8 1 dataset
Motif ES_0h ES_0h-E2F8_MA0865.3 9 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 130 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 51 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 141 bp overlap
ERG 4 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 419 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 227 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 262 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 272 bp overlap
ESR1 2 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 230 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 230 bp overlap
FLI1 2 datasets
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 263 bp overlap
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 235 bp overlap
GABPA 1 dataset
ChIP H1 ENCFF739QFD 341 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 298 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 219 bp overlap
ISL1 1 dataset
ChIP Huh-7 GSE77957.ISL1.Huh-7 280 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 214 bp overlap
JUND 1 dataset
ChIP HepG2 ENCFF869OPW 57 bp overlap
KLF11 2 datasets
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
Motif ES_0h ES_0h-KLF11_MA1512.2 10 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 220 bp overlap
MAFF 2 datasets
ChIP HepG2 ENCFF452YUT 79 bp overlap
ChIP K562 ENCFF071YKK 76 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 98 bp overlap
ChIP K562 ENCFF455EEO 158 bp overlap
MAFK 4 datasets
ChIP HepG2 ENCFF743ZOF 51 bp overlap
ChIP HepG2 ENCFF767LDG 61 bp overlap
ChIP IMR-90 ENCFF336DHZ 68 bp overlap
ChIP K562 ENCFF380WHM 72 bp overlap
MSANTD3 2 datasets
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
Motif ES_0h ES_0h-MSANTD3_MA1523.2 7 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
NANOG 1 dataset
ChIP WA01 ERP004238.NANOG.WA01 328 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 384 bp overlap
NFYC 1 dataset
ChIP HepG2 ENCFF836FYP 52 bp overlap
NR1D1 1 dataset
Motif ES_0h ES_0h-NR1D1_MA1531.2 14 bp overlap
NR5A1 2 datasets
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Motif ES_0h ES_0h-NR5A1_MA1540.3 12 bp overlap
NR6A1 2 datasets
Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap
Motif ES_0h ES_0h-NR6A1_MA1541.2 14 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 523 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 484 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 320 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 294 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 379 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 180 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF706IUS 234 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 409 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 475 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 564 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 373 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 338 bp overlap
REST 2 datasets
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 525 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 472 bp overlap
RUNX1 1 dataset
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 416 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 317 bp overlap
Rarb 2 datasets
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Motif ES_0h ES_0h-Rarb_MA0858.1 17 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 246 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPI1 2 datasets
ChIP HL-60 ENCFF645GBT 225 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 137 bp overlap
SREBP2 3 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 158 bp overlap
ChIP HCC70 GSE126380.SREBP2.HCC70 389 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 326 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 401 bp overlap
TBX20 2 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
TBX5 2 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 281 bp overlap
TP53 2 datasets
Motif DE_12h DE_12h-TP53_MA0106.3 18 bp overlap
Motif ES_0h ES_0h-TP53_MA0106.3 18 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 333 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif ES_0h ES_0h-Tbx6_MA1567.3 9 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 522 bp overlap
YY2 1 dataset
Motif ES_0h ES_0h-YY2_MA0748.3 7 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 492 bp overlap
ChIP K562 ENCFF875HLX 461 bp overlap
ZBTB6 2 datasets
ChIP HEK293 ENCFF881ECZ 103 bp overlap
ChIP HEK293 ENCSR619OUC.ZBTB6.HEK293 261 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 428 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 288 bp overlap
ZNF202 2 datasets
ChIP HEK293 ENCFF574FZA 341 bp overlap
ChIP HEK293 ENCSR996FYT.ZNF202.HEK293 330 bp overlap
ZNF213 1 dataset
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 85 bp overlap
ZNF331 2 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap
ZNF530 1 dataset
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF701 1 dataset
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF770 1 dataset
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
Zfp335 2 datasets
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zfx 1 dataset
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap