chr3 : 172,324,183 172,324,507
324 bp 81 TFs 0 linked genes
This 324 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:172,319,183 – 172,329,507
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE120058.ARID1A.RMG-I 324 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 324 bp overlap
ATF2 1 dataset
ChIP K562 ENCFF139ZZG 90 bp overlap
ATF3 2 datasets
ChIP liver ENCFF375GID 56 bp overlap
ChIP liver ENCFF867MFZ 68 bp overlap
ATF4 2 datasets
ChIP HepG2 ENCFF819ULE 62 bp overlap
ChIP K-562 ENCSR145TSJ.ATF4.K-562 120 bp overlap
BRCA1 1 dataset
ChIP MCF-10A GSE40591.BRCA1.MCF-10A 107 bp overlap
BRD2 1 dataset
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 123 bp overlap
BRD4 8 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 255 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 131 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 130 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 62 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 324 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 85 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 324 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 324 bp overlap
CEBPA 2 datasets
ChIP MV4-11 GSE88746.CEBPA.MV4-11 55 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 94 bp overlap
CEBPB 3 datasets
ChIP A549 ENCFF781RLJ 53 bp overlap
ChIP A549 ENCFF797MXZ 84 bp overlap
ChIP K562 ENCFF584CTB 99 bp overlap
CEBPG 4 datasets
ChIP K-562 ENCSR620VIC.CEBPG.K-562 199 bp overlap
ChIP K-562 ENCSR490LWA.CEBPG.K-562 96 bp overlap
ChIP K562 ENCFF651CMK 102 bp overlap
ChIP MCF-7 ENCFF155HZI 137 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCFF078QRQ 324 bp overlap
CREBBP 1 dataset
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 160 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 105 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 233 bp overlap
ChIP BLaER1 ENCFF460KDD 81 bp overlap
EGR1 1 dataset
ChIP liver ENCFF130MBW 112 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
EP300 2 datasets
ChIP A549 ENCFF960ZEI 267 bp overlap
ChIP A549 ENCFF960ZEI 324 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 186 bp overlap
FOS 1 dataset
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 131 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 252 bp overlap
FOSL2 2 datasets
ChIP HepG2 ENCFF548CXY 58 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 154 bp overlap
FOXA1 2 datasets
ChIP liver ERP002306.FOXA1.liver 64 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 203 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 310 bp overlap
ChIP DE DE-FOXA2-2 324 bp overlap
ChIP liver ENCFF877SFI 239 bp overlap
ChIP liver ENCFF888VJF 76 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 173 bp overlap
FOXL2 6 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 324 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 324 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 324 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 324 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 324 bp overlap
ChIP SVOG-3e_no-DOX-mut GSE126171.FOXL2.SVOG-3e_no-DOX-mut 263 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 148 bp overlap
GATA2 6 datasets
ChIP ESF GSE108408.GATA2.ESF 174 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 140 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 274 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 324 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 260 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 304 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 324 bp overlap
ChIP DE DE-GATA4-2 324 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 195 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 260 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 324 bp overlap
ChIP DE DE-GATA6-2 324 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 276 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 221 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 119 bp overlap
GLYR1 1 dataset
ChIP HeLa GSE20303.GLYR1.HeLa 324 bp overlap
HES2 1 dataset
ChIP A549 ENCFF842NHR 60 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 70 bp overlap
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 182 bp overlap
JUN 2 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 147 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 218 bp overlap
JUNB 2 datasets
ChIP HAEC GSE89970.JUNB.HAEC 324 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 324 bp overlap
JUND 5 datasets
ChIP liver ENCFF007WWT 62 bp overlap
ChIP liver ENCFF557PGE 117 bp overlap
ChIP liver ENCFF557PGE 324 bp overlap
ChIP liver ENCFF557PGE 141 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 117 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 324 bp overlap
MAX 1 dataset
ChIP liver ENCFF584QGB 63 bp overlap
MED1 4 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 324 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 87 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 180 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 206 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 216 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 169 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 146 bp overlap
NR3C1 5 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 324 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 308 bp overlap
ChIP MCF-10A_EGF_DEX_20min GSE102355.NR3C1.MCF-10A_EGF_DEX_20min 324 bp overlap
ChIP MCF-10A_EGF_DEX_60min GSE102355.NR3C1.MCF-10A_EGF_DEX_60min 150 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 324 bp overlap
PAF1 1 dataset
ChIP HepG2 ENCFF949UAN 184 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 179 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 216 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 233 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 175 bp overlap
PGR 2 datasets
ChIP AB32 GSE31129.PGR.AB32 164 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 181 bp overlap
POLR2A 8 datasets
ChIP HepG2 ENCFF736SLT 243 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 324 bp overlap
ChIP sigmoid colon ENCFF725QFT 183 bp overlap
ChIP sigmoid colon ENCFF748YVT 324 bp overlap
ChIP sigmoid colon ENCFF754JQR 214 bp overlap
ChIP stomach ENCFF607ZPU 238 bp overlap
ChIP stomach ENCFF820WZN 217 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 139 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 179 bp overlap
RAD21 3 datasets
ChIP liver ENCFF485PAC 94 bp overlap
ChIP liver ENCFF522JHE 104 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 65 bp overlap
RBM22 3 datasets
ChIP HepG2 ENCFF292RVQ 324 bp overlap
ChIP HepG2 ENCFF561IAJ 324 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 153 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 324 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 324 bp overlap
RELA 3 datasets
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 89 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 93 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 86 bp overlap
REST 1 dataset
ChIP liver ENCFF240FWT 91 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 251 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 58 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 144 bp overlap
SMAD2-3 10 datasets
ChIP HGrC1_C134W GSE138496.SMAD2-3.HGrC1_C134W 217 bp overlap
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 324 bp overlap
ChIP HGrC1_C134W-TGF_SMAD4-KO GSE138496.SMAD2-3.HGrC1_C134W-TGF_SMAD4-KO 324 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD2-3.HGrC1_C134W-TGF_parental 246 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 313 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 324 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 226 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 259 bp overlap
ChIP KGN_C134W GSE138496.SMAD2-3.KGN_C134W 231 bp overlap
ChIP KGN_TGF GSE138496.SMAD2-3.KGN_TGF 324 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 324 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 308 bp overlap
SMAD4 8 datasets
ChIP HGrC1_C134W GSE138496.SMAD4.HGrC1_C134W 281 bp overlap
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 324 bp overlap
ChIP HGrC1_C134W-TGF_SMAD2-3-KO GSE138496.SMAD4.HGrC1_C134W-TGF_SMAD2-3-KO 262 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 323 bp overlap
ChIP HGrC1_WT GSE138496.SMAD4.HGrC1_WT 324 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD4.HGrC1_WT-TGF 300 bp overlap
ChIP K562 ENCFF628RBP 324 bp overlap
ChIP KGN_TGF GSE138496.SMAD4.KGN_TGF 324 bp overlap
SMARCA4 3 datasets
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 89 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 243 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 324 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 292 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 180 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 75 bp overlap
SS18-SSX 3 datasets
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 230 bp overlap
ChIP fibroblast_6aa GSE139053.SS18-SSX.fibroblast_6aa 223 bp overlap
ChIP fibroblast_7aa GSE139053.SS18-SSX.fibroblast_7aa 53 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 313 bp overlap
STAT3 12 datasets
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 158 bp overlap
ChIP HeLa-S3 ENCFF655DGU 93 bp overlap
ChIP HeLa-S3 ENCSR000EDC.STAT3.HeLa-S3 99 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 229 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 186 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 324 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 190 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 224 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 195 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 324 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 247 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 243 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 234 bp overlap
TBP 1 dataset
ChIP HeLa-S3 ENCFF715NNJ 132 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 124 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 132 bp overlap
TP63 1 dataset
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 69 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 101 bp overlap
ChIP K562 ENCFF616RIL 169 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 123 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR887MXT.ZHX1.HeLa-S3 85 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR117WTM.ZNF24.K-562 324 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 324 bp overlap